STRINGSTRING
Srot_3063 Srot_3063 Srot_0100 Srot_0100 Srot_0871 Srot_0871 Srot_1262 Srot_1262 Srot_1634 Srot_1634 Srot_1667 Srot_1667 Srot_1714 Srot_1714 Srot_2213 Srot_2213 Srot_2371 Srot_2371 Srot_3048 Srot_3048
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_3063Two component transcriptional regulator, winged helix family; KEGG: mva:Mvan_5009 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver. (238 aa)
Srot_0100KEGG: mmi:MMAR_4942 two-component system response phosphate regulon transcriptional regulator, PhoP; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver. (240 aa)
Srot_0871Two component transcriptional regulator, winged helix family; KEGG: rer:RER_37220 turgor pressure transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver. (250 aa)
Srot_1262Two component transcriptional regulator, winged helix family; KEGG: gbr:Gbro_1396 response regulator receiver; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver. (228 aa)
Srot_1634Two component transcriptional regulator, winged helix family; KEGG: mjl:Mjls_0654 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver. (228 aa)
Srot_1667Two component transcriptional regulator, winged helix family; KEGG: mva:Mvan_4429 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver. (241 aa)
Srot_1714KEGG: mab:MAB_3891c LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR. (213 aa)
Srot_2213Two component transcriptional regulator, winged helix family; KEGG: mjl:Mjls_1381 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver. (228 aa)
Srot_2371KEGG: mab:MAB_3891c LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR. (217 aa)
Srot_3048Putative two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; KEGG: msm:MSMEG_5784 transcriptional regulatory protein. (247 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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