STRINGSTRING
Srot_2550 Srot_2550 Srot_2088 Srot_2088 Srot_2062 Srot_2062 Srot_1983 Srot_1983 Srot_1862 Srot_1862 Srot_1721 Srot_1721 Srot_1709 Srot_1709 Srot_1406 Srot_1406 Srot_1273 Srot_1273 Srot_1044 Srot_1044 Srot_1005 Srot_1005 Srot_0667 Srot_0667 Srot_0817 Srot_0817 Srot_0568 Srot_0568 Srot_0552 Srot_0552 Srot_0178 Srot_0178 Srot_0094 Srot_0094 Srot_0092 Srot_0092 Srot_2916 Srot_2916 Srot_2914 Srot_2914 Srot_2880 Srot_2880 Srot_2853 Srot_2853 Srot_2836 Srot_2836 Srot_2835 Srot_2835 Srot_2694 Srot_2694
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_2550PFAM: General substrate transporter; KEGG: rha:RHA1_ro06795 MFS superfamily proline/betaine transporter. (483 aa)
Srot_2088PFAM: major facilitator superfamily MFS_1; KEGG: nml:Namu_0537 major facilitator superfamily MFS_1. (498 aa)
Srot_2062PFAM: major facilitator superfamily MFS_1; KEGG: mjl:Mjls_1896 major facilitator transporter. (401 aa)
Srot_1983PFAM: major facilitator superfamily MFS_1; KEGG: rer:RER_15430 drug resistance efflux protein. (488 aa)
Srot_1862PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro06618 major facilitator superfamily multidrug transporter. (569 aa)
Srot_1721PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_3816 major facilitator transporter. (387 aa)
Srot_1709PFAM: major facilitator superfamily MFS_1; KEGG: ypg:YpAngola_A3455 major facilitator transporter. (417 aa)
Srot_1406PFAM: General substrate transporter; KEGG: pnu:Pnuc_1663 general substrate transporter. (429 aa)
Srot_1273PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro04995 major facilitator superfamily multidrug resistance protein. (458 aa)
Srot_1044PFAM: major facilitator superfamily MFS_1; KEGG: cai:Caci_4138 major facilitator superfamily MFS_1. (452 aa)
Srot_1005PFAM: major facilitator superfamily MFS_1; KEGG: rer:RER_55050 drug resistance efflux protein. (467 aa)
Srot_0667PFAM: major facilitator superfamily MFS_1; KEGG: rer:RER_47880 drug resistance efflux protein. (408 aa)
Srot_0817PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro04330 major facilitator transporter. (460 aa)
Srot_0568PFAM: major facilitator superfamily MFS_1; KEGG: mmi:MMAR_0577 integral membrane transport protein. (419 aa)
Srot_0552PFAM: major facilitator superfamily MFS_1; KEGG: mmi:MMAR_2797 sialic acid-transport integral membrane protein NanT. (422 aa)
Srot_0178PFAM: major facilitator superfamily MFS_1; KEGG: svi:Svir_32050 nitrate/nitrite transporter. (472 aa)
Srot_0094PFAM: major facilitator superfamily MFS_1; KEGG: msl:Msil_0516 major facilitator superfamily MFS_1. (398 aa)
Srot_0092PFAM: major facilitator superfamily MFS_1; KEGG: ach:Achl_0532 major facilitator superfamily MFS_1. (428 aa)
Srot_2916Sugar transporter; KEGG: sgr:SGR_1900 putative glucose transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (473 aa)
Srot_2914PFAM: major facilitator superfamily MFS_1; KEGG: mkm:Mkms_4542 EmrB/QacA family drug resistance transporter. (458 aa)
Srot_2880Sugar transporter; KEGG: msm:MSMEG_5559 metabolite/sugar transport protein; TIGRFAM: sugar transporter; PFAM: General substrate transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (475 aa)
Srot_2853KEGG: gbr:Gbro_1238 major facilitator superfamily MFS_1. (571 aa)
Srot_2836PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro06364 major facilitator superfamily cyanate symporter. (434 aa)
Srot_2835PFAM: major facilitator superfamily MFS_1; KEGG: rop:ROP_64260 putative nitrite/nitrate transporter. (467 aa)
Srot_2694PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_3378 major facilitator transporter. (489 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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