STRINGSTRING
Srot_0102 Srot_0102 metN metN Srot_0104 Srot_0104 Srot_0105 Srot_0105 Srot_0264 Srot_0264 Srot_0265 Srot_0265 Srot_0266 Srot_0266 Srot_0324 Srot_0324 Srot_0842 Srot_0842 Srot_0843 Srot_0843 Srot_0844 Srot_0844 cysA cysA Srot_1016 Srot_1016 Srot_1017 Srot_1017 Srot_1018 Srot_1018 Srot_1019 Srot_1019 Srot_1119 Srot_1119 Srot_1120 Srot_1120 Srot_1121 Srot_1121 Srot_1246 Srot_1246 Srot_1247 Srot_1247 Srot_1742 Srot_1742 ftsE ftsE Srot_2044 Srot_2044 Srot_2045 Srot_2045 Srot_2046 Srot_2046 Srot_2047 Srot_2047 Srot_2048 Srot_2048 Srot_2050 Srot_2050 Srot_2051 Srot_2051 Srot_2429 Srot_2429 Srot_2430 Srot_2430 Srot_2549 Srot_2549 Srot_2611 Srot_2611 Srot_2612 Srot_2612 Srot_2613 Srot_2613 Srot_2614 Srot_2614 Srot_2633 Srot_2633 Srot_2719 Srot_2719
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_0102PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_2802c ABC transporter permease. (230 aa)
metNABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (351 aa)
Srot_0104PFAM: NLPA lipoprotein; KEGG: mab:MAB_2804c ABC transporter periplasmic protein. (314 aa)
Srot_0105PFAM: NLPA lipoprotein; KEGG: mab:MAB_2804c ABC transporter periplasmic protein. (301 aa)
Srot_0264KEGG: mva:Mvan_2538 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1. (282 aa)
Srot_0265NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (260 aa)
Srot_0266KEGG: rop:ROP_34560 putative molybdate ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (313 aa)
Srot_0324ABC-type molybdate transport system periplasmic component-like protein; KEGG: mno:Mnod_2760 extracellular solute-binding protein family 1. (306 aa)
Srot_0842KEGG: gbr:Gbro_3174 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1. (335 aa)
Srot_0843Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. (277 aa)
Srot_0844KEGG: gbr:Gbro_3172 sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (269 aa)
cysASulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (330 aa)
Srot_1016PFAM: basic membrane lipoprotein; KEGG: svi:Svir_05390 nucleoside-binding protein. (378 aa)
Srot_1017KEGG: svi:Svir_05400 nucleoside ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (503 aa)
Srot_1018PFAM: inner-membrane translocator; KEGG: svi:Svir_05410 nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (357 aa)
Srot_1019PFAM: inner-membrane translocator; KEGG: sen:SACE_6577 putative sugar ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family. (400 aa)
Srot_1119PFAM: extracellular solute-binding protein family 5; KEGG: mpa:MAP0409 hypothetical protein. (563 aa)
Srot_1120PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_42440 putative ABC transporter permease protein. (309 aa)
Srot_1121PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro04335 ABC peptide transporter, permease component. (303 aa)
Srot_1246KEGG: rer:RER_48160 ABC transporter permease/ATP- binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (509 aa)
Srot_1247TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: rer:RER_48150 ABC transporter permease/ATP- binding protein CydC; SMART: AAA ATPase. (553 aa)
Srot_1742Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (308 aa)
ftsECell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (230 aa)
Srot_2044PFAM: Mammalian cell entry related domain protein; KEGG: mab:MAB_4035 putative Mce family protein. (316 aa)
Srot_2045PFAM: Mammalian cell entry related domain protein; KEGG: mab:MAB_4034 putative Mce family protein. (348 aa)
Srot_2046PFAM: Mammalian cell entry related domain protein; KEGG: mab:MAB_4033 putative Mce family protein. (375 aa)
Srot_2047PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11170 putative Mce family protein. (347 aa)
Srot_2048PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11160 putative Mce family protein. (363 aa)
Srot_2050PFAM: protein of unknown function DUF140; KEGG: mab:MAB_4029 putative YrbE family protein. (290 aa)
Srot_2051PFAM: protein of unknown function DUF140; KEGG: mab:MAB_4028 putative YrbE family protein. (280 aa)
Srot_2429KEGG: mab:MAB_2261c ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (592 aa)
Srot_2430KEGG: mab:MAB_2262c ABC transporter ATP-binding protein; PFAM: ABC transporter related; FAD-binding 9 siderophore-interacting domain protein; Siderophore- interacting protein; ABC transporter transmembrane region; SMART: AAA ATPase. (866 aa)
Srot_2549KEGG: rer:RER_41440 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (389 aa)
Srot_2611PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rha:RHA1_ro06004 ABC amino acid transporter, substrate binding component. (314 aa)
Srot_2612KEGG: rer:RER_41290 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (389 aa)
Srot_2613PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro06002 ABC amino acid transporter, permease component. (213 aa)
Srot_2614PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mjl:Mjls_5345 binding-protein-dependent transport systems inner membrane component. (225 aa)
Srot_2633KEGG: mab:MAB_1065 ABC transporter ATP-binding protein; PFAM: ABC transporter domain protein; ABC transporter related; SMART: AAA ATPase. (629 aa)
Srot_2719KEGG: rop:ROP_16520 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (352 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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