STRINGSTRING
ADG14149.1 ADG14149.1 ADG17307.1 ADG17307.1 ADG17308.1 ADG17308.1 ADG17309.1 ADG17309.1 ADG17310.1 ADG17310.1 ADG17706.1 ADG17706.1 ADG17712.1 ADG17712.1 ADG17713.1 ADG17713.1 ADG17714.1 ADG17714.1 ADG17715.1 ADG17715.1 ADG17716.1 ADG17716.1 ADG18676.1 ADG18676.1 ADG20341.1 ADG20341.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADG14149.1KEGG: bxe:Bxe_A4404 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (260 aa)
ADG17307.1PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_5189 major facilitator transporter. (434 aa)
ADG17308.1KEGG: bph:Bphy_5190 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH. (240 aa)
ADG17309.1PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_5191 major facilitator transporter. (430 aa)
ADG17310.1PFAM: amidohydrolase 2; KEGG: bph:Bphy_5192 amidohydrolase 2. (291 aa)
ADG17706.1PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_4856 NAD-dependent epimerase/dehydratase. (265 aa)
ADG17712.1KEGG: bpy:Bphyt_4862 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH. (247 aa)
ADG17713.1D-galactonate transporter; KEGG: bxe:Bxe_B1803 major facilitator superfamily D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1. (452 aa)
ADG17714.1KEGG: bpy:Bphyt_4864 5-dehydro-4-deoxyglucarate dehydratase; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase; Belongs to the DapA family. (305 aa)
ADG17715.1TIGRFAM: galactarate dehydratase; KEGG: bpy:Bphyt_4865 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein. (529 aa)
ADG17716.1PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_4866 NAD-dependent epimerase/dehydratase. (283 aa)
ADG18676.1TIGRFAM: glucarate dehydratase; KEGG: bpy:Bphyt_4102 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein. (449 aa)
ADG20341.1PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bpy:Bphyt_6284 mandelate racemase/muconate lactonizing protein. (429 aa)
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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