STRINGSTRING
ychF ychF ADG16967.1 ADG16967.1 ADG16984.1 ADG16984.1 ADG17559.1 ADG17559.1 ADG17334.1 ADG17334.1 ADG17436.1 ADG17436.1 ADG18163.1 ADG18163.1 ADG18123.1 ADG18123.1 ADG17914.1 ADG17914.1 ADG17869.1 ADG17869.1 ADG17776.1 ADG17776.1 ADG17625.1 ADG17625.1 ADG14200.1 ADG14200.1 ADG14671.1 ADG14671.1 ADG15458.1 ADG15458.1 ADG15949.1 ADG15949.1 thrS thrS ADG16062.1 ADG16062.1 ADG16318.1 ADG16318.1 ADG16353.1 ADG16353.1 ADG20556.1 ADG20556.1 ADG20241.1 ADG20241.1 ADG20040.1 ADG20040.1 ADG19823.1 ADG19823.1 ADG19802.1 ADG19802.1 ADG19639.1 ADG19639.1 ADG19243.1 ADG19243.1 ADG19140.1 ADG19140.1 ADG19060.1 ADG19060.1 ADG18663.1 ADG18663.1 ADG18212.1 ADG18212.1 ADG19436.1 ADG19436.1 ADG16434.1 ADG16434.1 ADG16880.1 ADG16880.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (364 aa)
ADG16967.1phenylacetate-CoA oxygenase/reductase, PaaK subunit; KEGG: bxe:Bxe_A0291 phenylacetic acid degradation NADH oxidoreductase PaaE; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein. (362 aa)
ADG16984.1PFAM: protein of unknown function DUF82; KEGG: bxe:Bxe_A0270 hypothetical protein. (269 aa)
ADG17559.1PFAM: ferredoxin; KEGG: reu:Reut_B4590 ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding. (212 aa)
ADG17334.1Phthalate 4,5-dioxygenase; KEGG: bvi:Bcep1808_3499 ferredoxin; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein. (321 aa)
ADG17436.1PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_B2224 2Fe-2S ferredoxin. (259 aa)
ADG18163.1PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: reu:Reut_B4341 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region. (316 aa)
ADG18123.1PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: azo:azo1960 putative 2-oxo-1,2-dihydroquinoline 8-monooxygenase, reductase component. (342 aa)
ADG17914.1PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_B1318 2Fe-2S iron-sulfur cluster binding protein. (185 aa)
ADG17869.1PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: bpy:Bphyt_5071 oxidoreductase FAD-binding domain protein. (396 aa)
ADG17776.1PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_B1691 putative oxidoreductase alpha subunit. (151 aa)
ADG17625.1Phthalate 4,5-dioxygenase; KEGG: bac:BamMC406_5125 ferredoxin; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein. (319 aa)
ADG14200.1PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_A4351 putative carbon-monoxide dehydrogenase, small subunit (CoxS). (174 aa)
ADG14671.1Xanthine dehydrogenase, small subunit; KEGG: bxe:Bxe_A3886 putative xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; ferredoxin; CO dehydrogenase flavoprotein domain protein. (505 aa)
ADG15458.1KEGG: bpy:Bphyt_1809 molybdopterin converting factor, subunit 1; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein. (85 aa)
ADG15949.1KEGG: bpy:Bphyt_2574 ferredoxin, 2Fe-2S type, ISC system; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin. (113 aa)
thrSthreonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). (635 aa)
ADG16062.1(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (747 aa)
ADG16318.1KEGG: bxe:Bxe_A0950 xanthine dehydrogenase, subunit A; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; ferredoxin; CO dehydrogenase flavoprotein domain protein. (539 aa)
ADG16353.1(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (786 aa)
ADG20556.1phenylacetate-CoA oxygenase/reductase, PaaK subunit; KEGG: bxe:Bxe_A0291 phenylacetic acid degradation NADH oxidoreductase PaaE; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein. (362 aa)
ADG20241.1KEGG: bgl:bglu_2g07110 succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (235 aa)
ADG20040.1PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: rme:Rmet_4884 oxidoreductase FAD-binding region. (340 aa)
ADG19823.1PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; GntR domain protein; cytochrome P450; KEGG: bph:Bphy_6093 oxidoreductase FAD-binding subunit. (933 aa)
ADG19802.1PFAM: thiamineS protein; KEGG: rso:RS04773 hypothetical protein. (89 aa)
ADG19639.1PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bph:Bphy_6671 2Fe-2S iron-sulfur cluster binding domain-containing protein. (178 aa)
ADG19243.1PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_B2616 putative isoquinoline 1-oxidoreductase, alpha subunit. (153 aa)
ADG19140.1KEGG: bxe:Bxe_B2892 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (234 aa)
ADG19060.1PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bpy:Bphyt_2150 ferredoxin. (322 aa)
ADG18663.1PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B5777 phthalate 4,5-dioxygenase. (319 aa)
ADG18212.1PFAM: ferredoxin; KEGG: bpy:Bphyt_5660 ferredoxin. (102 aa)
ADG19436.1PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bcm:Bcenmc03_7023 2Fe-2S iron-sulfur cluster binding domain-containing protein. (160 aa)
ADG16434.1PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: bpy:Bphyt_3138 CDP-6-deoxy-delta-3,4-glucoseen reductase. (343 aa)
ADG16880.1KEGG: bxe:Bxe_A0384 sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein. (78 aa)
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.