(5 nodes) Naphthalene degradation network (Paraburkholderia sp. CCGE1002)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADG18111.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: dar:Daro_1348 zinc-containing alcohol dehydrogenase superfamily protein. (369 aa)
	ADG18129.1	PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: vei:Veis_4413 alcohol dehydrogenase. (205 aa)
	ADG18885.1	PFAM: FAD dependent oxidoreductase; KEGG: bmj:BMULJ_04471 salicylate hydroxylase. (405 aa)
	ADG19795.1	KEGG: bpy:Bphyt_5114 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa)
	ADG20003.1	KEGG: bpy:Bphyt_6316 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein. (328 aa)

Your Current Organism:

Paraburkholderia sp. CCGE1002

NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADG18111.1	ADG18129.1	BC1002_4111	BC1002_4131	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: dar:Daro_1348 zinc-containing alcohol dehydrogenase superfamily protein.	PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: vei:Veis_4413 alcohol dehydrogenase.	0.932
ADG18111.1	ADG19795.1	BC1002_4111	BC1002_5918	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: dar:Daro_1348 zinc-containing alcohol dehydrogenase superfamily protein.	KEGG: bpy:Bphyt_5114 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.952
ADG18111.1	ADG20003.1	BC1002_4111	BC1002_6141	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: dar:Daro_1348 zinc-containing alcohol dehydrogenase superfamily protein.	KEGG: bpy:Bphyt_6316 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein.	0.923
ADG18129.1	ADG18111.1	BC1002_4131	BC1002_4111	PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: vei:Veis_4413 alcohol dehydrogenase.	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: dar:Daro_1348 zinc-containing alcohol dehydrogenase superfamily protein.	0.932
ADG18129.1	ADG19795.1	BC1002_4131	BC1002_5918	PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: vei:Veis_4413 alcohol dehydrogenase.	KEGG: bpy:Bphyt_5114 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.919
ADG18129.1	ADG20003.1	BC1002_4131	BC1002_6141	PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: vei:Veis_4413 alcohol dehydrogenase.	KEGG: bpy:Bphyt_6316 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein.	0.928
ADG19795.1	ADG18111.1	BC1002_5918	BC1002_4111	KEGG: bpy:Bphyt_5114 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: dar:Daro_1348 zinc-containing alcohol dehydrogenase superfamily protein.	0.952
ADG19795.1	ADG18129.1	BC1002_5918	BC1002_4131	KEGG: bpy:Bphyt_5114 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: vei:Veis_4413 alcohol dehydrogenase.	0.919
ADG19795.1	ADG20003.1	BC1002_5918	BC1002_6141	KEGG: bpy:Bphyt_5114 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	KEGG: bpy:Bphyt_6316 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein.	0.949
ADG20003.1	ADG18111.1	BC1002_6141	BC1002_4111	KEGG: bpy:Bphyt_6316 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein.	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: dar:Daro_1348 zinc-containing alcohol dehydrogenase superfamily protein.	0.923
ADG20003.1	ADG18129.1	BC1002_6141	BC1002_4131	KEGG: bpy:Bphyt_6316 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein.	PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: vei:Veis_4413 alcohol dehydrogenase.	0.928
ADG20003.1	ADG19795.1	BC1002_6141	BC1002_5918	KEGG: bpy:Bphyt_6316 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein.	KEGG: bpy:Bphyt_5114 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.949