STRINGSTRING
livH_2 livH_2 livH_3 livH_3 lptB_2 lptB_2 livF_4 livF_4 braC braC livJ_1 livJ_1 livH_4 livH_4 AEN65353.1 AEN65353.1 livF_5 livF_5 livF_6 livF_6 livF_7 livF_7 livG livG livM_2 livM_2 livH_5 livH_5 livK livK livJ_2 livJ_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
livH_2ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: cko:CKO_02933 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (329 aa)
livH_3ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: cko:CKO_02934 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (368 aa)
lptB_2KEGG: cko:CKO_02935 hypothetical protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (255 aa)
livF_4KEGG: cko:CKO_02936 hypothetical protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (239 aa)
braCPFAM: Extracellular ligand-binding receptor; KEGG: cko:CKO_02937 hypothetical protein. (385 aa)
livJ_1PFAM: Extracellular ligand-binding receptor; KEGG: enc:ECL_01382 branched-chain amino acid transport system substrate-binding protein. (373 aa)
livH_4ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: enc:ECL_01381 branched-chain amino acid transport system permease protein. (304 aa)
AEN65353.1ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: ent:Ent638_2493 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (429 aa)
livF_5KEGG: ent:Ent638_2494 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (291 aa)
livF_6KEGG: ent:Ent638_2495 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (239 aa)
livF_7ABC transporter related protein; KEGG: enc:ECL_04812 branched-chain amino acid transport system ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily. (237 aa)
livGABC transporter related protein; KEGG: enc:ECL_04813 branched-chain amino acid transport system ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (255 aa)
livM_2ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: enc:ECL_04814 branched-chain amino acid transport system permease protein. (425 aa)
livH_5ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: enc:ECL_04815 branched-chain amino acid transport system permease protein. (308 aa)
livKPFAM: Extracellular ligand-binding receptor; KEGG: enc:ECL_04816 branched-chain amino acid transport system substrate-binding protein. (369 aa)
livJ_2PFAM: Extracellular ligand-binding receptor; KEGG: ecv:APECO1_2999 Leu/Ile/Val-binding protein precursor. (417 aa)
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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