STRINGSTRING
livF_5 livF_5 livF_3 livF_3 livG livG lptB_4 lptB_4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
livF_5KEGG: ent:Ent638_2494 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (291 aa)
livF_3KEGG: ent:Ent638_1991 ABC transporter related; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtD; PFAM: ABC transporter-like. (265 aa)
livGABC transporter related protein; KEGG: enc:ECL_04813 branched-chain amino acid transport system ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (255 aa)
lptB_4ABC transporter related protein; KEGG: enc:ECL_04583 lipopolysaccharide export system ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (241 aa)
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
Server load: low (12%) [HD]