49 items (Helobdella robusta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1ED93_HELRO	Uncharacterized protein. (527 aa)
	T1EDM3_HELRO	Uncharacterized protein. (428 aa)
	T1EGS9_HELRO	Uncharacterized protein. (392 aa)
	T1ELW2_HELRO	Uncharacterized protein. (537 aa)
	T1EP03_HELRO	Uncharacterized protein. (200 aa)
	T1EPN3_HELRO	Uncharacterized protein. (132 aa)
	T1ERU2_HELRO	Uncharacterized protein. (253 aa)
	T1EU22_HELRO	Uncharacterized protein. (578 aa)
	T1EU23_HELRO	Uncharacterized protein. (578 aa)
	T1EUE4_HELRO	Uncharacterized protein. (210 aa)
	T1EV58_HELRO	Uncharacterized protein. (170 aa)
	T1EVD9_HELRO	Uncharacterized protein. (740 aa)
	T1EXE5_HELRO	Uncharacterized protein. (225 aa)
	T1EXH8_HELRO	DUF667 domain-containing protein. (191 aa)
	T1EZ80_HELRO	Uncharacterized protein. (487 aa)
	T1EZA0_HELRO	Uncharacterized protein. (170 aa)
	T1F2D6_HELRO	Uncharacterized protein. (410 aa)
	T1F2E4_HELRO	Uncharacterized protein. (555 aa)
	T1F2P8_HELRO	Uncharacterized protein. (553 aa)
	T1F3M3_HELRO	DUF667 domain-containing protein. (201 aa)
	T1F4X6_HELRO	Uncharacterized protein. (198 aa)
	T1F8K4_HELRO	Uncharacterized protein. (202 aa)
	T1F907_HELRO	Uncharacterized protein. (248 aa)
	T1FBH0_HELRO	WD_REPEATS_REGION domain-containing protein. (610 aa)
	T1FCG1_HELRO	Uncharacterized protein. (172 aa)
	T1FFG0_HELRO	Calponin-homology (CH) domain-containing protein. (165 aa)
	T1FGV8_HELRO	Calponin-homology (CH) domain-containing protein. (190 aa)
	T1FGW4_HELRO	Uncharacterized protein. (419 aa)
	T1FLK7_HELRO	Uncharacterized protein. (123 aa)
	T1FLP8_HELRO	Uncharacterized protein. (136 aa)
	T1FMZ9_HELRO	Transgelin; Belongs to the calponin family. (210 aa)
	T1FP86_HELRO	Uncharacterized protein. (464 aa)
	T1FPB6_HELRO	WD_REPEATS_REGION domain-containing protein. (606 aa)
	T1FSA1_HELRO	Uncharacterized protein. (529 aa)
	T1FVE9_HELRO	Uncharacterized protein. (400 aa)
	T1FY52_HELRO	Uncharacterized protein. (527 aa)
	T1FYB0_HELRO	Uncharacterized protein. (409 aa)
	T1G050_HELRO	Uncharacterized protein. (495 aa)
	T1G064_HELRO	Uncharacterized protein. (410 aa)
	T1G3H3_HELRO	Uncharacterized protein. (553 aa)
	T1G3I7_HELRO	Uncharacterized protein. (134 aa)
	T1G4I1_HELRO	Enkurin domain-containing protein. (266 aa)
	T1G564_HELRO	Uncharacterized protein. (453 aa)
	T1G5J8_HELRO	Uncharacterized protein. (658 aa)
	T1G627_HELRO	Enkurin domain-containing protein. (254 aa)
	T1G7C4_HELRO	Uncharacterized protein. (109 aa)
	T1G7P1_HELRO	Uncharacterized protein. (74 aa)
	T1G7P4_HELRO	Uncharacterized protein. (379 aa)
	T1G7Y0_HELRO	Uncharacterized protein. (549 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1ED93_HELRO	T1EDM3_HELRO	T1ED93	T1EDM3	Uncharacterized protein.	Uncharacterized protein.	0.541
T1ED93_HELRO	T1EP03_HELRO	T1ED93	T1EP03	Uncharacterized protein.	Uncharacterized protein.	0.430
T1ED93_HELRO	T1EPN3_HELRO	T1ED93	T1EPN3	Uncharacterized protein.	Uncharacterized protein.	0.612
T1ED93_HELRO	T1ERU2_HELRO	T1ED93	T1ERU2	Uncharacterized protein.	Uncharacterized protein.	0.469
T1ED93_HELRO	T1EV58_HELRO	T1ED93	T1EV58	Uncharacterized protein.	Uncharacterized protein.	0.480
T1ED93_HELRO	T1EXE5_HELRO	T1ED93	T1EXE5	Uncharacterized protein.	Uncharacterized protein.	0.513
T1ED93_HELRO	T1EXH8_HELRO	T1ED93	T1EXH8	Uncharacterized protein.	DUF667 domain-containing protein.	0.552
T1ED93_HELRO	T1EZ80_HELRO	T1ED93	T1EZ80	Uncharacterized protein.	Uncharacterized protein.	0.463
T1ED93_HELRO	T1EZA0_HELRO	T1ED93	T1EZA0	Uncharacterized protein.	Uncharacterized protein.	0.484
T1ED93_HELRO	T1F2E4_HELRO	T1ED93	T1F2E4	Uncharacterized protein.	Uncharacterized protein.	0.422
T1ED93_HELRO	T1F2P8_HELRO	T1ED93	T1F2P8	Uncharacterized protein.	Uncharacterized protein.	0.469
T1ED93_HELRO	T1F3M3_HELRO	T1ED93	T1F3M3	Uncharacterized protein.	DUF667 domain-containing protein.	0.552
T1ED93_HELRO	T1F4X6_HELRO	T1ED93	T1F4X6	Uncharacterized protein.	Uncharacterized protein.	0.430
T1ED93_HELRO	T1F8K4_HELRO	T1ED93	T1F8K4	Uncharacterized protein.	Uncharacterized protein.	0.496
T1ED93_HELRO	T1FBH0_HELRO	T1ED93	T1FBH0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.472
T1ED93_HELRO	T1FLK7_HELRO	T1ED93	T1FLK7	Uncharacterized protein.	Uncharacterized protein.	0.513
T1ED93_HELRO	T1FLP8_HELRO	T1ED93	T1FLP8	Uncharacterized protein.	Uncharacterized protein.	0.513
T1ED93_HELRO	T1FPB6_HELRO	T1ED93	T1FPB6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.472
T1ED93_HELRO	T1FSA1_HELRO	T1ED93	T1FSA1	Uncharacterized protein.	Uncharacterized protein.	0.422
T1ED93_HELRO	T1G4I1_HELRO	T1ED93	T1G4I1	Uncharacterized protein.	Enkurin domain-containing protein.	0.577