(12 nodes) Mixed, incl. BBSome, and Regulation of protein localization to ciliary membrane network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1EEF4_HELRO	Uncharacterized protein. (341 aa)
	T1EK87_HELRO	Uncharacterized protein. (57 aa)
	T1ELR8_HELRO	TPR_REGION domain-containing protein. (498 aa)
	T1EMT4_HELRO	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (622 aa)
	T1FNM9_HELRO	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	T1FPQ8_HELRO	TPR_REGION domain-containing protein. (433 aa)
	T1FT46_HELRO	BBS1 domain-containing protein. (644 aa)
	T1FZD8_HELRO	Uncharacterized protein. (316 aa)
	T1G1W0_HELRO	Uncharacterized protein. (837 aa)
	T1G213_HELRO	BTB domain-containing protein. (585 aa)
	T1G3W6_HELRO	Uncharacterized protein. (677 aa)
	T1G9V1_HELRO	Bardet-Biedl syndrome 2 protein homolog. (718 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EEF4_HELRO	T1EK87_HELRO	T1EEF4	T1EK87	Uncharacterized protein.	Uncharacterized protein.	0.764
T1EEF4_HELRO	T1ELR8_HELRO	T1EEF4	T1ELR8	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.990
T1EEF4_HELRO	T1FPQ8_HELRO	T1EEF4	T1FPQ8	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.979
T1EEF4_HELRO	T1FT46_HELRO	T1EEF4	T1FT46	Uncharacterized protein.	BBS1 domain-containing protein.	0.993
T1EEF4_HELRO	T1FZD8_HELRO	T1EEF4	T1FZD8	Uncharacterized protein.	Uncharacterized protein.	0.827
T1EEF4_HELRO	T1G1W0_HELRO	T1EEF4	T1G1W0	Uncharacterized protein.	Uncharacterized protein.	0.994
T1EEF4_HELRO	T1G3W6_HELRO	T1EEF4	T1G3W6	Uncharacterized protein.	Uncharacterized protein.	0.988
T1EEF4_HELRO	T1G9V1_HELRO	T1EEF4	T1G9V1	Uncharacterized protein.	Bardet-Biedl syndrome 2 protein homolog.	0.988
T1EK87_HELRO	T1EEF4_HELRO	T1EK87	T1EEF4	Uncharacterized protein.	Uncharacterized protein.	0.764
T1EK87_HELRO	T1ELR8_HELRO	T1EK87	T1ELR8	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.898
T1EK87_HELRO	T1EMT4_HELRO	T1EK87	T1EMT4	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.622
T1EK87_HELRO	T1FPQ8_HELRO	T1EK87	T1FPQ8	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.565
T1EK87_HELRO	T1FT46_HELRO	T1EK87	T1FT46	Uncharacterized protein.	BBS1 domain-containing protein.	0.915
T1EK87_HELRO	T1G1W0_HELRO	T1EK87	T1G1W0	Uncharacterized protein.	Uncharacterized protein.	0.911
T1EK87_HELRO	T1G3W6_HELRO	T1EK87	T1G3W6	Uncharacterized protein.	Uncharacterized protein.	0.918
T1EK87_HELRO	T1G9V1_HELRO	T1EK87	T1G9V1	Uncharacterized protein.	Bardet-Biedl syndrome 2 protein homolog.	0.918
T1ELR8_HELRO	T1EEF4_HELRO	T1ELR8	T1EEF4	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.990
T1ELR8_HELRO	T1EK87_HELRO	T1ELR8	T1EK87	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.898
T1ELR8_HELRO	T1EMT4_HELRO	T1ELR8	T1EMT4	TPR_REGION domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.838
T1ELR8_HELRO	T1FNM9_HELRO	T1ELR8	T1FNM9	TPR_REGION domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.580