8 items (Helobdella robusta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1EDM9_HELRO	Small nuclear ribonucleoprotein Sm D3. (137 aa)
	T1EDY3_HELRO	Tr-type G domain-containing protein. (977 aa)
	T1EHH7_HELRO	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
	T1EME9_HELRO	Sm domain-containing protein. (87 aa)
	T1G160_HELRO	Small nuclear ribonucleoprotein Sm D2. (115 aa)
	T1G1Z4_HELRO	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (127 aa)
	T1G6V5_HELRO	Small nuclear ribonucleoprotein G. (77 aa)
	T1G930_HELRO	MPN domain-containing protein. (2327 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EDM9_HELRO	T1EDY3_HELRO	T1EDM9	T1EDY3	Small nuclear ribonucleoprotein Sm D3.	Tr-type G domain-containing protein.	0.999
T1EDM9_HELRO	T1EHH7_HELRO	T1EDM9	T1EHH7	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
T1EDM9_HELRO	T1EME9_HELRO	T1EDM9	T1EME9	Small nuclear ribonucleoprotein Sm D3.	Sm domain-containing protein.	0.999
T1EDM9_HELRO	T1G160_HELRO	T1EDM9	T1G160	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D2.	0.999
T1EDM9_HELRO	T1G1Z4_HELRO	T1EDM9	T1G1Z4	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
T1EDM9_HELRO	T1G6V5_HELRO	T1EDM9	T1G6V5	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein G.	0.999
T1EDM9_HELRO	T1G930_HELRO	T1EDM9	T1G930	Small nuclear ribonucleoprotein Sm D3.	MPN domain-containing protein.	0.998
T1EDY3_HELRO	T1EDM9_HELRO	T1EDY3	T1EDM9	Tr-type G domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.999
T1EDY3_HELRO	T1EHH7_HELRO	T1EDY3	T1EHH7	Tr-type G domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
T1EDY3_HELRO	T1EME9_HELRO	T1EDY3	T1EME9	Tr-type G domain-containing protein.	Sm domain-containing protein.	0.998
T1EDY3_HELRO	T1G160_HELRO	T1EDY3	T1G160	Tr-type G domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
T1EDY3_HELRO	T1G1Z4_HELRO	T1EDY3	T1G1Z4	Tr-type G domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
T1EDY3_HELRO	T1G6V5_HELRO	T1EDY3	T1G6V5	Tr-type G domain-containing protein.	Small nuclear ribonucleoprotein G.	0.999
T1EDY3_HELRO	T1G930_HELRO	T1EDY3	T1G930	Tr-type G domain-containing protein.	MPN domain-containing protein.	0.999
T1EHH7_HELRO	T1EDM9_HELRO	T1EHH7	T1EDM9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D3.	0.999
T1EHH7_HELRO	T1EDY3_HELRO	T1EHH7	T1EDY3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Tr-type G domain-containing protein.	0.999
T1EHH7_HELRO	T1EME9_HELRO	T1EHH7	T1EME9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Sm domain-containing protein.	0.999
T1EHH7_HELRO	T1G160_HELRO	T1EHH7	T1G160	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D2.	0.999
T1EHH7_HELRO	T1G1Z4_HELRO	T1EHH7	T1G1Z4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
T1EHH7_HELRO	T1G6V5_HELRO	T1EHH7	T1G6V5	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein G.	0.999