STRINGSTRING
T1G160_HELRO T1G160_HELRO T1EDM9_HELRO T1EDM9_HELRO T1EFG2_HELRO T1EFG2_HELRO T1EHH7_HELRO T1EHH7_HELRO T1EME9_HELRO T1EME9_HELRO T1EMU0_HELRO T1EMU0_HELRO T1EY49_HELRO T1EY49_HELRO T1F2W0_HELRO T1F2W0_HELRO T1F326_HELRO T1F326_HELRO T1F3E1_HELRO T1F3E1_HELRO T1FC45_HELRO T1FC45_HELRO T1FM24_HELRO T1FM24_HELRO T1FMP6_HELRO T1FMP6_HELRO T1FNW4_HELRO T1FNW4_HELRO T1FP75_HELRO T1FP75_HELRO T1FUX0_HELRO T1FUX0_HELRO T1G1Z4_HELRO T1G1Z4_HELRO T1G2W5_HELRO T1G2W5_HELRO T1G6V5_HELRO T1G6V5_HELRO T1G930_HELRO T1G930_HELRO T1G9L3_HELRO T1G9L3_HELRO
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T1G160_HELROSmall nuclear ribonucleoprotein Sm D2. (115 aa)
T1EDM9_HELROSmall nuclear ribonucleoprotein Sm D3. (137 aa)
T1EFG2_HELROU1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (141 aa)
T1EHH7_HELROSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
T1EME9_HELROSm domain-containing protein. (87 aa)
T1EMU0_HELROTudor domain-containing protein. (198 aa)
T1EY49_HELROU6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (137 aa)
T1F2W0_HELROWD_REPEATS_REGION domain-containing protein. (406 aa)
T1F326_HELROUncharacterized protein. (220 aa)
T1F3E1_HELROUncharacterized protein. (216 aa)
T1FC45_HELRORRM domain-containing protein. (1155 aa)
T1FM24_HELROWD_REPEATS_REGION domain-containing protein. (327 aa)
T1FMP6_HELRONop domain-containing protein. (495 aa)
T1FNW4_HELROUncharacterized protein. (516 aa)
T1FP75_HELROSm domain-containing protein. (174 aa)
T1FUX0_HELROUncharacterized protein. (312 aa)
T1G1Z4_HELROSmall nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (127 aa)
T1G2W5_HELROTPR_REGION domain-containing protein. (933 aa)
T1G6V5_HELROSmall nuclear ribonucleoprotein G. (77 aa)
T1G930_HELROMPN domain-containing protein. (2327 aa)
T1G9L3_HELROUncharacterized protein. (563 aa)
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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