61 items (Helobdella robusta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1G1B4_HELRO	TFIIE beta domain-containing protein. (233 aa)
	T1ED15_HELRO	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (653 aa)
	T1EDN3_HELRO	S1 motif domain-containing protein. (172 aa)
	T1EEK4_HELRO	TAFII28 domain-containing protein. (132 aa)
	T1EFN7_HELRO	Uncharacterized protein. (203 aa)
	T1EHJ2_HELRO	BTP domain-containing protein. (96 aa)
	T1EHM8_HELRO	PHD-type domain-containing protein. (59 aa)
	T1EI62_HELRO	Uncharacterized protein. (158 aa)
	T1EJS3_HELRO	RPOL4c domain-containing protein. (120 aa)
	T1ELH3_HELRO	CBFD_NFYB_HMF domain-containing protein. (201 aa)
	T1ELK7_HELRO	Uncharacterized protein. (714 aa)
	T1EMD4_HELRO	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (122 aa)
	T1EP68_HELRO	Uncharacterized protein. (2031 aa)
	T1EPC2_HELRO	Uncharacterized protein. (575 aa)
	T1EPD7_HELRO	TFIID_20kDa domain-containing protein. (232 aa)
	T1EPF8_HELRO	TAF domain-containing protein. (613 aa)
	T1EQG5_HELRO	B-block_TFIIIC domain-containing protein. (1558 aa)
	T1ESX2_HELRO	PHD-type domain-containing protein. (145 aa)
	T1EUP5_HELRO	Nucleic_acid_bd domain-containing protein. (1503 aa)
	T1EVB4_HELRO	Uncharacterized protein. (293 aa)
	T1EY16_HELRO	Uncharacterized protein. (344 aa)
	T1EZE8_HELRO	BTP domain-containing protein. (444 aa)
	T1F2R0_HELRO	GRIP domain-containing protein. (782 aa)
	T1F393_HELRO	Uncharacterized protein. (548 aa)
	T1F3V4_HELRO	Uncharacterized protein. (538 aa)
	T1F3V5_HELRO	Uncharacterized protein. (583 aa)
	T1F3V9_HELRO	RPOL4c domain-containing protein. (126 aa)
	T1F4B4_HELRO	BTP domain-containing protein. (276 aa)
	T1F740_HELRO	Uncharacterized protein. (107 aa)
	T1F7H4_HELRO	Uncharacterized protein. (293 aa)
	T1F9J6_HELRO	Uncharacterized protein. (180 aa)
	T1FAY9_HELRO	S1 motif domain-containing protein. (309 aa)
	T1FEC5_HELRO	Uncharacterized protein. (146 aa)
	T1FM77_HELRO	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (513 aa)
	T1FMR7_HELRO	Uncharacterized protein. (311 aa)
	T1FNI7_HELRO	TFIIB-type domain-containing protein. (321 aa)
	T1FPI3_HELRO	Uncharacterized protein. (606 aa)
	T1FQ96_HELRO	Uncharacterized protein. (286 aa)
	T1FQX8_HELRO	Uncharacterized protein. (407 aa)
	T1FT01_HELRO	Peptidase_M1 domain-containing protein. (1254 aa)
	T1FT68_HELRO	TAFII55_N domain-containing protein. (240 aa)
	T1FTH5_HELRO	TAFH domain-containing protein. (823 aa)
	T1FV10_HELRO	TFIIB-type domain-containing protein. (764 aa)
	T1FVP9_HELRO	Uncharacterized protein. (1922 aa)
	T1FWI2_HELRO	Uncharacterized protein. (214 aa)
	T1FWT5_HELRO	Uncharacterized protein. (411 aa)
	T1FY11_HELRO	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (108 aa)
	T1FZ57_HELRO	Uncharacterized protein. (252 aa)
	T1FZP7_HELRO	Uncharacterized protein. (108 aa)
	T1G1E1_HELRO	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (107 aa)
	T1G378_HELRO	Uncharacterized protein. (265 aa)
	T1G436_HELRO	Uncharacterized protein. (77 aa)
	T1G478_HELRO	TFIIB-type domain-containing protein. (317 aa)
	T1G5Q1_HELRO	Uncharacterized protein. (65 aa)
	T1G671_HELRO	Uncharacterized protein. (196 aa)
	T1G6C5_HELRO	PHD-type domain-containing protein. (95 aa)
	T1G7B3_HELRO	HMG box domain-containing protein. (284 aa)
	T1G7S2_HELRO	HTH TFE/IIEalpha-type domain-containing protein. (217 aa)
	T1G7V9_HELRO	CYCLIN domain-containing protein; Belongs to the cyclin family. (233 aa)
	T1G860_HELRO	RPOL4c domain-containing protein. (140 aa)
	T1G8V8_HELRO	TAF domain-containing protein. (468 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1ED15_HELRO	T1EY16_HELRO	T1ED15	T1EY16	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	Uncharacterized protein.	0.988
T1ED15_HELRO	T1G7B3_HELRO	T1ED15	T1G7B3	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	HMG box domain-containing protein.	0.575
T1EDN3_HELRO	T1EEK4_HELRO	T1EDN3	T1EEK4	S1 motif domain-containing protein.	TAFII28 domain-containing protein.	0.856
T1EDN3_HELRO	T1EFN7_HELRO	T1EDN3	T1EFN7	S1 motif domain-containing protein.	Uncharacterized protein.	0.554
T1EDN3_HELRO	T1EHJ2_HELRO	T1EDN3	T1EHJ2	S1 motif domain-containing protein.	BTP domain-containing protein.	0.734
T1EDN3_HELRO	T1EHM8_HELRO	T1EDN3	T1EHM8	S1 motif domain-containing protein.	PHD-type domain-containing protein.	0.707
T1EDN3_HELRO	T1EJS3_HELRO	T1EDN3	T1EJS3	S1 motif domain-containing protein.	RPOL4c domain-containing protein.	0.459
T1EDN3_HELRO	T1ELK7_HELRO	T1EDN3	T1ELK7	S1 motif domain-containing protein.	Uncharacterized protein.	0.974
T1EDN3_HELRO	T1EMD4_HELRO	T1EDN3	T1EMD4	S1 motif domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
T1EDN3_HELRO	T1EPC2_HELRO	T1EDN3	T1EPC2	S1 motif domain-containing protein.	Uncharacterized protein.	0.771
T1EDN3_HELRO	T1EPD7_HELRO	T1EDN3	T1EPD7	S1 motif domain-containing protein.	TFIID_20kDa domain-containing protein.	0.850
T1EDN3_HELRO	T1EPF8_HELRO	T1EDN3	T1EPF8	S1 motif domain-containing protein.	TAF domain-containing protein.	0.760
T1EDN3_HELRO	T1ESX2_HELRO	T1EDN3	T1ESX2	S1 motif domain-containing protein.	PHD-type domain-containing protein.	0.977
T1EDN3_HELRO	T1EVB4_HELRO	T1EDN3	T1EVB4	S1 motif domain-containing protein.	Uncharacterized protein.	0.601
T1EDN3_HELRO	T1EY16_HELRO	T1EDN3	T1EY16	S1 motif domain-containing protein.	Uncharacterized protein.	0.461
T1EDN3_HELRO	T1EZE8_HELRO	T1EDN3	T1EZE8	S1 motif domain-containing protein.	BTP domain-containing protein.	0.734
T1EDN3_HELRO	T1F3V4_HELRO	T1EDN3	T1F3V4	S1 motif domain-containing protein.	Uncharacterized protein.	0.771
T1EDN3_HELRO	T1F3V5_HELRO	T1EDN3	T1F3V5	S1 motif domain-containing protein.	Uncharacterized protein.	0.771
T1EDN3_HELRO	T1F3V9_HELRO	T1EDN3	T1F3V9	S1 motif domain-containing protein.	RPOL4c domain-containing protein.	0.459
T1EDN3_HELRO	T1F4B4_HELRO	T1EDN3	T1F4B4	S1 motif domain-containing protein.	BTP domain-containing protein.	0.821