(15 nodes) Stem cell population maintenance network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1EDP0_HELRO	Uncharacterized protein. (564 aa)
	T1EIC3_HELRO	Uncharacterized protein. (84 aa)
	T1EM97_HELRO	Structural maintenance of chromosomes protein. (1222 aa)
	T1EMG0_HELRO	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (383 aa)
	T1EPG0_HELRO	Uncharacterized protein. (622 aa)
	T1EVG3_HELRO	Uncharacterized protein; Belongs to the MT-A70-like family. (141 aa)
	T1F5X4_HELRO	Uncharacterized protein. (338 aa)
	T1F761_HELRO	BRCT domain-containing protein. (872 aa)
	T1FVP4_HELRO	Plus3 domain-containing protein. (665 aa)
	T1FPP7_HELRO	Uncharacterized protein. (598 aa)
	T1FBI6_HELRO	BHLH domain-containing protein. (350 aa)
	T1FAR3_HELRO	MamL-1 domain-containing protein. (983 aa)
	T1FZQ4_HELRO	YL1_C domain-containing protein. (352 aa)
	T1G3M2_HELRO	Uncharacterized protein. (124 aa)
	T1ED82_HELRO	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (135 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1ED82_HELRO	T1FVP4_HELRO	T1ED82	T1FVP4	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Plus3 domain-containing protein.	0.572
T1EM97_HELRO	T1F761_HELRO	T1EM97	T1F761	Structural maintenance of chromosomes protein.	BRCT domain-containing protein.	0.498
T1EPG0_HELRO	T1F761_HELRO	T1EPG0	T1F761	Uncharacterized protein.	BRCT domain-containing protein.	0.595
T1F5X4_HELRO	T1FVP4_HELRO	T1F5X4	T1FVP4	Uncharacterized protein.	Plus3 domain-containing protein.	0.999
T1F5X4_HELRO	T1FZQ4_HELRO	T1F5X4	T1FZQ4	Uncharacterized protein.	YL1_C domain-containing protein.	0.405
T1F5X4_HELRO	T1G3M2_HELRO	T1F5X4	T1G3M2	Uncharacterized protein.	Uncharacterized protein.	0.679
T1F761_HELRO	T1EM97_HELRO	T1F761	T1EM97	BRCT domain-containing protein.	Structural maintenance of chromosomes protein.	0.498
T1F761_HELRO	T1EPG0_HELRO	T1F761	T1EPG0	BRCT domain-containing protein.	Uncharacterized protein.	0.595
T1F761_HELRO	T1FPP7_HELRO	T1F761	T1FPP7	BRCT domain-containing protein.	Uncharacterized protein.	0.595
T1FPP7_HELRO	T1F761_HELRO	T1FPP7	T1F761	Uncharacterized protein.	BRCT domain-containing protein.	0.595
T1FVP4_HELRO	T1ED82_HELRO	T1FVP4	T1ED82	Plus3 domain-containing protein.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.572
T1FVP4_HELRO	T1F5X4_HELRO	T1FVP4	T1F5X4	Plus3 domain-containing protein.	Uncharacterized protein.	0.999
T1FVP4_HELRO	T1G3M2_HELRO	T1FVP4	T1G3M2	Plus3 domain-containing protein.	Uncharacterized protein.	0.999
T1FZQ4_HELRO	T1F5X4_HELRO	T1FZQ4	T1F5X4	YL1_C domain-containing protein.	Uncharacterized protein.	0.405
T1FZQ4_HELRO	T1G3M2_HELRO	T1FZQ4	T1G3M2	YL1_C domain-containing protein.	Uncharacterized protein.	0.405
T1G3M2_HELRO	T1F5X4_HELRO	T1G3M2	T1F5X4	Uncharacterized protein.	Uncharacterized protein.	0.679
T1G3M2_HELRO	T1FVP4_HELRO	T1G3M2	T1FVP4	Uncharacterized protein.	Plus3 domain-containing protein.	0.999
T1G3M2_HELRO	T1FZQ4_HELRO	T1G3M2	T1FZQ4	Uncharacterized protein.	YL1_C domain-containing protein.	0.405