(22 nodes) Kinesin binding network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1G502_HELRO	RH1 domain-containing protein. (191 aa)
	T1G9U0_HELRO	Uncharacterized protein. (376 aa)
	T1G5Y5_HELRO	Uncharacterized protein. (133 aa)
	T1G4V8_HELRO	Uncharacterized protein. (242 aa)
	T1G4B4_HELRO	Uncharacterized protein. (596 aa)
	T1G3V1_HELRO	Uncharacterized protein. (806 aa)
	T1G284_HELRO	Uncharacterized protein. (753 aa)
	T1G0E3_HELRO	Uncharacterized protein. (855 aa)
	T1FZZ9_HELRO	RH1 domain-containing protein. (125 aa)
	T1FYI0_HELRO	Doublecortin domain-containing protein. (92 aa)
	T1FUV0_HELRO	Uncharacterized protein. (400 aa)
	T1FTR0_HELRO	BCNT-C domain-containing protein. (309 aa)
	T1FT25_HELRO	Uncharacterized protein. (1128 aa)
	T1FR81_HELRO	RH2 domain-containing protein. (777 aa)
	T1FQF3_HELRO	Uncharacterized protein. (388 aa)
	T1FQ55_HELRO	Doublecortin domain-containing protein. (376 aa)
	T1FD28_HELRO	Uncharacterized protein. (125 aa)
	T1FB40_HELRO	Uncharacterized protein. (517 aa)
	T1F187_HELRO	Uncharacterized protein. (147 aa)
	T1F186_HELRO	Uncharacterized protein. (531 aa)
	T1EG03_HELRO	TPR_REGION domain-containing protein. (553 aa)
	T1EFS4_HELRO	TPR_REGION domain-containing protein. (614 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EFS4_HELRO	T1F186_HELRO	T1EFS4	T1F186	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.421
T1EFS4_HELRO	T1FR81_HELRO	T1EFS4	T1FR81	TPR_REGION domain-containing protein.	RH2 domain-containing protein.	0.464
T1EFS4_HELRO	T1FT25_HELRO	T1EFS4	T1FT25	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.515
T1EFS4_HELRO	T1FZZ9_HELRO	T1EFS4	T1FZZ9	TPR_REGION domain-containing protein.	RH1 domain-containing protein.	0.464
T1EFS4_HELRO	T1G0E3_HELRO	T1EFS4	T1G0E3	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.632
T1EFS4_HELRO	T1G284_HELRO	T1EFS4	T1G284	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.515
T1EFS4_HELRO	T1G4V8_HELRO	T1EFS4	T1G4V8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.574
T1EFS4_HELRO	T1G502_HELRO	T1EFS4	T1G502	TPR_REGION domain-containing protein.	RH1 domain-containing protein.	0.464
T1EFS4_HELRO	T1G9U0_HELRO	T1EFS4	T1G9U0	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.464
T1EG03_HELRO	T1F186_HELRO	T1EG03	T1F186	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.424
T1EG03_HELRO	T1FR81_HELRO	T1EG03	T1FR81	TPR_REGION domain-containing protein.	RH2 domain-containing protein.	0.464
T1EG03_HELRO	T1FT25_HELRO	T1EG03	T1FT25	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.515
T1EG03_HELRO	T1FZZ9_HELRO	T1EG03	T1FZZ9	TPR_REGION domain-containing protein.	RH1 domain-containing protein.	0.464
T1EG03_HELRO	T1G0E3_HELRO	T1EG03	T1G0E3	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.632
T1EG03_HELRO	T1G284_HELRO	T1EG03	T1G284	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.515
T1EG03_HELRO	T1G4V8_HELRO	T1EG03	T1G4V8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.574
T1EG03_HELRO	T1G502_HELRO	T1EG03	T1G502	TPR_REGION domain-containing protein.	RH1 domain-containing protein.	0.464
T1EG03_HELRO	T1G9U0_HELRO	T1EG03	T1G9U0	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.464
T1F186_HELRO	T1EFS4_HELRO	T1F186	T1EFS4	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.421
T1F186_HELRO	T1EG03_HELRO	T1F186	T1EG03	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.424