(44 nodes) Z disc network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1EYA3_HELRO	PDZ domain-containing protein. (709 aa)
	T1ES16_HELRO	Uncharacterized protein. (4163 aa)
	T1ER50_HELRO	Uncharacterized protein. (186 aa)
	T1EMW3_HELRO	Uncharacterized protein. (344 aa)
	T1EMU0_HELRO	Tudor domain-containing protein. (198 aa)
	T1EMF5_HELRO	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (295 aa)
	T1G9I2_HELRO	Uncharacterized protein. (885 aa)
	T1EGZ1_HELRO	Uncharacterized protein. (260 aa)
	T1EGF7_HELRO	Uncharacterized protein. (827 aa)
	T1EG52_HELRO	Uncharacterized protein. (282 aa)
	T1EFZ6_HELRO	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (586 aa)
	T1EEP7_HELRO	Uncharacterized protein. (285 aa)
	T1ELM8_HELRO	Uncharacterized protein. (285 aa)
	T1G947_HELRO	Uncharacterized protein. (303 aa)
	T1G8U8_HELRO	Uncharacterized protein. (879 aa)
	T1G8Q7_HELRO	RR_TM4-6 domain-containing protein. (161 aa)
	T1G6P3_HELRO	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (386 aa)
	T1G422_HELRO	Uncharacterized protein. (185 aa)
	T1G3J5_HELRO	Uncharacterized protein. (241 aa)
	T1G2G1_HELRO	Uncharacterized protein. (331 aa)
	T1G2B1_HELRO	Uncharacterized protein. (181 aa)
	T1G1Y1_HELRO	Uncharacterized protein. (832 aa)
	T1G147_HELRO	Uncharacterized protein. (2209 aa)
	T1G0R3_HELRO	Uncharacterized protein. (1734 aa)
	T1G0J6_HELRO	Uncharacterized protein. (1018 aa)
	T1G0H3_HELRO	Uncharacterized protein. (535 aa)
	T1FZ93_HELRO	Uncharacterized protein. (312 aa)
	T1FWJ9_HELRO	PID domain-containing protein. (634 aa)
	T1FW42_HELRO	Uncharacterized protein. (886 aa)
	T1FW41_HELRO	Uncharacterized protein. (206 aa)
	T1FVN4_HELRO	Uncharacterized protein. (4586 aa)
	T1FU29_HELRO	Uncharacterized protein. (3066 aa)
	T1FSG1_HELRO	Uncharacterized protein. (834 aa)
	T1FS72_HELRO	Uncharacterized protein. (390 aa)
	T1FS49_HELRO	Uncharacterized protein. (290 aa)
	T1FRM4_HELRO	Uncharacterized protein. (1663 aa)
	T1FQY6_HELRO	Uncharacterized protein. (833 aa)
	T1FP58_HELRO	Uncharacterized protein. (885 aa)
	T1FP05_HELRO	Uncharacterized protein. (2356 aa)
	T1FGK1_HELRO	PDZ domain-containing protein. (530 aa)
	T1FCM3_HELRO	Uncharacterized protein. (828 aa)
	T1FAE2_HELRO	Uncharacterized protein. (140 aa)
	T1F6S3_HELRO	Uncharacterized protein. (1224 aa)
	T1EZZ8_HELRO	Uncharacterized protein. (632 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EEP7_HELRO	T1EGZ1_HELRO	T1EEP7	T1EGZ1	Uncharacterized protein.	Uncharacterized protein.	0.904
T1EEP7_HELRO	T1FS72_HELRO	T1EEP7	T1FS72	Uncharacterized protein.	Uncharacterized protein.	0.875
T1EFZ6_HELRO	T1G6P3_HELRO	T1EFZ6	T1G6P3	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.903
T1EGF7_HELRO	T1EZZ8_HELRO	T1EGF7	T1EZZ8	Uncharacterized protein.	Uncharacterized protein.	0.900
T1EGZ1_HELRO	T1EEP7_HELRO	T1EGZ1	T1EEP7	Uncharacterized protein.	Uncharacterized protein.	0.904
T1EGZ1_HELRO	T1FS72_HELRO	T1EGZ1	T1FS72	Uncharacterized protein.	Uncharacterized protein.	0.875
T1EMU0_HELRO	T1ER50_HELRO	T1EMU0	T1ER50	Tudor domain-containing protein.	Uncharacterized protein.	0.633
T1EMW3_HELRO	T1FP58_HELRO	T1EMW3	T1FP58	Uncharacterized protein.	Uncharacterized protein.	0.486
T1EMW3_HELRO	T1G8U8_HELRO	T1EMW3	T1G8U8	Uncharacterized protein.	Uncharacterized protein.	0.486
T1EMW3_HELRO	T1G9I2_HELRO	T1EMW3	T1G9I2	Uncharacterized protein.	Uncharacterized protein.	0.486
T1ER50_HELRO	T1EMU0_HELRO	T1ER50	T1EMU0	Uncharacterized protein.	Tudor domain-containing protein.	0.633
T1EZZ8_HELRO	T1EGF7_HELRO	T1EZZ8	T1EGF7	Uncharacterized protein.	Uncharacterized protein.	0.900
T1EZZ8_HELRO	T1FCM3_HELRO	T1EZZ8	T1FCM3	Uncharacterized protein.	Uncharacterized protein.	0.900
T1EZZ8_HELRO	T1FQY6_HELRO	T1EZZ8	T1FQY6	Uncharacterized protein.	Uncharacterized protein.	0.899
T1EZZ8_HELRO	T1FSG1_HELRO	T1EZZ8	T1FSG1	Uncharacterized protein.	Uncharacterized protein.	0.899
T1EZZ8_HELRO	T1G1Y1_HELRO	T1EZZ8	T1G1Y1	Uncharacterized protein.	Uncharacterized protein.	0.899
T1FCM3_HELRO	T1EZZ8_HELRO	T1FCM3	T1EZZ8	Uncharacterized protein.	Uncharacterized protein.	0.900
T1FP58_HELRO	T1EMW3_HELRO	T1FP58	T1EMW3	Uncharacterized protein.	Uncharacterized protein.	0.486
T1FP58_HELRO	T1G2B1_HELRO	T1FP58	T1G2B1	Uncharacterized protein.	Uncharacterized protein.	0.573
T1FP58_HELRO	T1G422_HELRO	T1FP58	T1G422	Uncharacterized protein.	Uncharacterized protein.	0.573