(40 nodes) Midbody network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1FMZ0_HELRO	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	T1G8V5_HELRO	Uncharacterized protein. (454 aa)
	T1G805_HELRO	CENP-C_C domain-containing protein. (218 aa)
	T1G5I0_HELRO	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (451 aa)
	T1G3X3_HELRO	Uncharacterized protein. (180 aa)
	T1G1F5_HELRO	MIT domain-containing protein. (241 aa)
	T1G0P6_HELRO	Uncharacterized protein. (118 aa)
	T1G0C8_HELRO	Uncharacterized protein. (583 aa)
	T1FZW0_HELRO	Uncharacterized protein. (199 aa)
	T1FYL3_HELRO	Uncharacterized protein. (215 aa)
	T1FVH0_HELRO	Uncharacterized protein. (1066 aa)
	T1FUP9_HELRO	Uncharacterized protein; Belongs to the AAA ATPase family. (363 aa)
	T1FUH3_HELRO	INCENP_ARK-bind domain-containing protein. (1692 aa)
	T1FTK4_HELRO	Uncharacterized protein. (360 aa)
	T1FTF3_HELRO	Uncharacterized protein. (784 aa)
	T1FRW1_HELRO	CENP-C_C domain-containing protein. (372 aa)
	T1FQS9_HELRO	Uncharacterized protein. (1019 aa)
	T1FND7_HELRO	Uncharacterized protein. (335 aa)
	T1ED79_HELRO	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	T1EDG8_HELRO	Protein kinase domain-containing protein. (348 aa)
	T1EE47_HELRO	CS domain-containing protein. (370 aa)
	T1EEX0_HELRO	USP domain-containing protein; Belongs to the peptidase C19 family. (389 aa)
	T1EFP5_HELRO	Phosphatidylinositol 3-kinase catalytic subunit type 3. (915 aa)
	T1EFU3_HELRO	UBIQUITIN_CONJUGAT_2 domain-containing protein. (838 aa)
	T1EFU8_HELRO	Uncharacterized protein. (821 aa)
	T1EGV0_HELRO	Uncharacterized protein. (179 aa)
	T1EI01_HELRO	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (290 aa)
	T1ELF7_HELRO	Uncharacterized protein. (492 aa)
	T1ELM1_HELRO	Uncharacterized protein. (212 aa)
	T1EM75_HELRO	HATPase_c domain-containing protein. (736 aa)
	T1ERQ4_HELRO	CMP/dCMP-type deaminase domain-containing protein. (186 aa)
	T1ESX6_HELRO	Urb2 domain-containing protein. (684 aa)
	T1ET82_HELRO	Uncharacterized protein. (455 aa)
	T1F197_HELRO	Uncharacterized protein. (703 aa)
	T1F3D7_HELRO	Uncharacterized protein. (282 aa)
	T1F3Z6_HELRO	Doublecortin domain-containing protein. (1246 aa)
	T1F5J4_HELRO	Uncharacterized protein. (377 aa)
	T1FCF8_HELRO	Rho-GAP domain-containing protein. (447 aa)
	T1FGI7_HELRO	Uncharacterized protein. (153 aa)
	T1FJ71_HELRO	Protein kinase domain-containing protein. (317 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EDG8_HELRO	T1EFU3_HELRO	T1EDG8	T1EFU3	Protein kinase domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.540
T1EDG8_HELRO	T1EI01_HELRO	T1EDG8	T1EI01	Protein kinase domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.576
T1EDG8_HELRO	T1FCF8_HELRO	T1EDG8	T1FCF8	Protein kinase domain-containing protein.	Rho-GAP domain-containing protein.	0.499
T1EDG8_HELRO	T1FVH0_HELRO	T1EDG8	T1FVH0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.570
T1EDG8_HELRO	T1G0C8_HELRO	T1EDG8	T1G0C8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.570
T1EDG8_HELRO	T1G5I0_HELRO	T1EDG8	T1G5I0	Protein kinase domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.605
T1EE47_HELRO	T1EI01_HELRO	T1EE47	T1EI01	CS domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.695
T1EE47_HELRO	T1ELF7_HELRO	T1EE47	T1ELF7	CS domain-containing protein.	Uncharacterized protein.	0.723
T1EE47_HELRO	T1F5J4_HELRO	T1EE47	T1F5J4	CS domain-containing protein.	Uncharacterized protein.	0.717
T1EE47_HELRO	T1FUH3_HELRO	T1EE47	T1FUH3	CS domain-containing protein.	INCENP_ARK-bind domain-containing protein.	0.787
T1EEX0_HELRO	T1EFU3_HELRO	T1EEX0	T1EFU3	USP domain-containing protein; Belongs to the peptidase C19 family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.580
T1EEX0_HELRO	T1ELM1_HELRO	T1EEX0	T1ELM1	USP domain-containing protein; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.589
T1EFU3_HELRO	T1EDG8_HELRO	T1EFU3	T1EDG8	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Protein kinase domain-containing protein.	0.540
T1EFU3_HELRO	T1EEX0_HELRO	T1EFU3	T1EEX0	UBIQUITIN_CONJUGAT_2 domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.580
T1EFU3_HELRO	T1ET82_HELRO	T1EFU3	T1ET82	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.419
T1EFU3_HELRO	T1F5J4_HELRO	T1EFU3	T1F5J4	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.844
T1EFU3_HELRO	T1FUH3_HELRO	T1EFU3	T1FUH3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	INCENP_ARK-bind domain-containing protein.	0.844
T1EFU3_HELRO	T1G5I0_HELRO	T1EFU3	T1G5I0	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.436
T1EGV0_HELRO	T1ELM1_HELRO	T1EGV0	T1ELM1	Uncharacterized protein.	Uncharacterized protein.	0.863
T1EGV0_HELRO	T1FUP9_HELRO	T1EGV0	T1FUP9	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.924