(13 nodes) Carboxy-terminal domain protein kinase complex network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1ELK7_HELRO	Uncharacterized protein. (714 aa)
	T1FME1_HELRO	General transcription factor IIH subunit. (388 aa)
	T1FMV6_HELRO	Uncharacterized protein. (293 aa)
	T1FNW1_HELRO	RING-type domain-containing protein. (314 aa)
	T1FZM7_HELRO	CYCLIN domain-containing protein; Belongs to the cyclin family. (265 aa)
	T1ECY9_HELRO	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (452 aa)
	T1FZW1_HELRO	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (447 aa)
	T1G436_HELRO	Uncharacterized protein. (77 aa)
	T1G6N7_HELRO	Uncharacterized protein; Belongs to the cyclin family. (290 aa)
	T1G7V9_HELRO	CYCLIN domain-containing protein; Belongs to the cyclin family. (233 aa)
	T1ED87_HELRO	Uncharacterized protein. (578 aa)
	T1EDV5_HELRO	Helicase ATP-binding domain-containing protein. (761 aa)
	T1EEC4_HELRO	CYCLIN domain-containing protein; Belongs to the cyclin family. (283 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1ECY9_HELRO	T1ED87_HELRO	T1ECY9	T1ED87	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.839
T1ECY9_HELRO	T1EDV5_HELRO	T1ECY9	T1EDV5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Helicase ATP-binding domain-containing protein.	0.666
T1ECY9_HELRO	T1EEC4_HELRO	T1ECY9	T1EEC4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.987
T1ECY9_HELRO	T1ELK7_HELRO	T1ECY9	T1ELK7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.858
T1ECY9_HELRO	T1FME1_HELRO	T1ECY9	T1FME1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	General transcription factor IIH subunit.	0.839
T1ECY9_HELRO	T1FMV6_HELRO	T1ECY9	T1FMV6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.844
T1ECY9_HELRO	T1FNW1_HELRO	T1ECY9	T1FNW1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RING-type domain-containing protein.	0.859
T1ECY9_HELRO	T1FZM7_HELRO	T1ECY9	T1FZM7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.987
T1ECY9_HELRO	T1FZW1_HELRO	T1ECY9	T1FZW1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.833
T1ECY9_HELRO	T1G436_HELRO	T1ECY9	T1G436	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.810
T1ECY9_HELRO	T1G6N7_HELRO	T1ECY9	T1G6N7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the cyclin family.	0.966
T1ECY9_HELRO	T1G7V9_HELRO	T1ECY9	T1G7V9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.928
T1ED87_HELRO	T1ECY9_HELRO	T1ED87	T1ECY9	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.839
T1ED87_HELRO	T1EDV5_HELRO	T1ED87	T1EDV5	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.999
T1ED87_HELRO	T1EEC4_HELRO	T1ED87	T1EEC4	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.816
T1ED87_HELRO	T1ELK7_HELRO	T1ED87	T1ELK7	Uncharacterized protein.	Uncharacterized protein.	0.999
T1ED87_HELRO	T1FME1_HELRO	T1ED87	T1FME1	Uncharacterized protein.	General transcription factor IIH subunit.	0.999
T1ED87_HELRO	T1FMV6_HELRO	T1ED87	T1FMV6	Uncharacterized protein.	Uncharacterized protein.	0.999
T1ED87_HELRO	T1FNW1_HELRO	T1ED87	T1FNW1	Uncharacterized protein.	RING-type domain-containing protein.	0.999
T1ED87_HELRO	T1FZM7_HELRO	T1ED87	T1FZM7	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.816