(8 nodes) Maintenance of protein localization in endoplasmic reticulum network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1FP35_HELRO	Uncharacterized protein. (664 aa)
	T1FZ63_HELRO	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (170 aa)
	T1FXK8_HELRO	ER lumen protein-retaining receptor. (213 aa)
	T1F763_HELRO	ER lumen protein-retaining receptor. (212 aa)
	T1EM62_HELRO	ER lumen protein-retaining receptor. (212 aa)
	T1EG13_HELRO	Uncharacterized protein. (213 aa)
	T1EEM1_HELRO	ANK_REP_REGION domain-containing protein. (397 aa)
	T1ED94_HELRO	Uncharacterized protein. (205 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EM62_HELRO	T1FZ63_HELRO	T1EM62	T1FZ63	ER lumen protein-retaining receptor.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.425
T1F763_HELRO	T1FZ63_HELRO	T1F763	T1FZ63	ER lumen protein-retaining receptor.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.425
T1FXK8_HELRO	T1FZ63_HELRO	T1FXK8	T1FZ63	ER lumen protein-retaining receptor.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.425
T1FZ63_HELRO	T1EM62_HELRO	T1FZ63	T1EM62	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	ER lumen protein-retaining receptor.	0.425
T1FZ63_HELRO	T1F763_HELRO	T1FZ63	T1F763	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	ER lumen protein-retaining receptor.	0.425
T1FZ63_HELRO	T1FXK8_HELRO	T1FZ63	T1FXK8	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	ER lumen protein-retaining receptor.	0.425