(40 nodes) Cell body network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1G1R6_HELRO	RING-type domain-containing protein. (422 aa)
	T1G1D4_HELRO	Uncharacterized protein. (372 aa)
	T1G1B3_HELRO	PDEase domain-containing protein; Belongs to the cyclic nucleotide phosphodiesterase family. (322 aa)
	T1FZK3_HELRO	PDEase domain-containing protein; Belongs to the cyclic nucleotide phosphodiesterase family. (417 aa)
	T1FZD0_HELRO	Uncharacterized protein. (627 aa)
	T1FYT6_HELRO	BH4_AAA_HYDROXYL_2 domain-containing protein. (336 aa)
	Syt4	Synaptotagmin 4. (335 aa)
	T1FX31_HELRO	Phosphodiesterase. (500 aa)
	T1FTQ3_HELRO	Uncharacterized protein. (251 aa)
	T1FTM0_HELRO	Aa_trans domain-containing protein. (616 aa)
	T1FTL6_HELRO	Aa_trans domain-containing protein. (511 aa)
	T1FRX3_HELRO	Uncharacterized protein. (526 aa)
	T1FRV7_HELRO	Uncharacterized protein. (2866 aa)
	T1FQ07_HELRO	Uncharacterized protein. (869 aa)
	T1FF98_HELRO	Uncharacterized protein. (1884 aa)
	T1FF31_HELRO	Uncharacterized protein. (184 aa)
	T1F9H0_HELRO	Uncharacterized protein. (710 aa)
	T1F7I4_HELRO	Aa_trans domain-containing protein. (519 aa)
	T1F2G8_HELRO	PDEase domain-containing protein; Belongs to the cyclic nucleotide phosphodiesterase family. (755 aa)
	T1F197_HELRO	Uncharacterized protein. (703 aa)
	T1ESF4_HELRO	Uncharacterized protein. (589 aa)
	T1EFZ5_HELRO	Uncharacterized protein. (444 aa)
	T1EEV3_HELRO	Uncharacterized protein. (605 aa)
	T1EMU0_HELRO	Tudor domain-containing protein. (198 aa)
	T1ED24_HELRO	Uncharacterized protein. (446 aa)
	T1EEA7_HELRO	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (619 aa)
	T1EEK2_HELRO	CaMBD domain-containing protein. (489 aa)
	T1EFH8_HELRO	Non-specific serine/threonine protein kinase. (537 aa)
	T1ELQ5_HELRO	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (498 aa)
	T1EGM8_HELRO	CaMBD domain-containing protein. (408 aa)
	T1EGA7_HELRO	Uncharacterized protein. (519 aa)
	T1EFZ6_HELRO	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (586 aa)
	T1G9I8_HELRO	Uncharacterized protein. (554 aa)
	T1G9A3_HELRO	Uncharacterized protein. (218 aa)
	T1G6Z1_HELRO	Uncharacterized protein. (443 aa)
	T1G6P3_HELRO	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (386 aa)
	T1G4V8_HELRO	Uncharacterized protein. (242 aa)
	T1G4V0_HELRO	Non-specific serine/threonine protein kinase. (523 aa)
	T1G4C8_HELRO	Phosphodiesterase. (445 aa)
	T1G303_HELRO	Uncharacterized protein. (178 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1ED24_HELRO	T1EGA7_HELRO	T1ED24	T1EGA7	Uncharacterized protein.	Uncharacterized protein.	0.454
T1ED24_HELRO	T1G6Z1_HELRO	T1ED24	T1G6Z1	Uncharacterized protein.	Uncharacterized protein.	0.454
T1ED24_HELRO	T1G9I8_HELRO	T1ED24	T1G9I8	Uncharacterized protein.	Uncharacterized protein.	0.454
T1EEA7_HELRO	T1FRV7_HELRO	T1EEA7	T1FRV7	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Uncharacterized protein.	0.426
T1EEV3_HELRO	T1FRV7_HELRO	T1EEV3	T1FRV7	Uncharacterized protein.	Uncharacterized protein.	0.666
T1EFH8_HELRO	T1ELQ5_HELRO	T1EFH8	T1ELQ5	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.901
T1EFH8_HELRO	T1G4V0_HELRO	T1EFH8	T1G4V0	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.901
T1EFZ6_HELRO	T1G6P3_HELRO	T1EFZ6	T1G6P3	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.903
T1EGA7_HELRO	T1ED24_HELRO	T1EGA7	T1ED24	Uncharacterized protein.	Uncharacterized protein.	0.454
T1EGA7_HELRO	T1FF98_HELRO	T1EGA7	T1FF98	Uncharacterized protein.	Uncharacterized protein.	0.454
T1EGA7_HELRO	T1FQ07_HELRO	T1EGA7	T1FQ07	Uncharacterized protein.	Uncharacterized protein.	0.454
T1EGA7_HELRO	T1G6Z1_HELRO	T1EGA7	T1G6Z1	Uncharacterized protein.	Uncharacterized protein.	0.905
T1EGA7_HELRO	T1G9I8_HELRO	T1EGA7	T1G9I8	Uncharacterized protein.	Uncharacterized protein.	0.907
T1ELQ5_HELRO	T1EFH8_HELRO	T1ELQ5	T1EFH8	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.901
T1ELQ5_HELRO	T1G4V0_HELRO	T1ELQ5	T1G4V0	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.901
T1ESF4_HELRO	T1FRV7_HELRO	T1ESF4	T1FRV7	Uncharacterized protein.	Uncharacterized protein.	0.568
T1F7I4_HELRO	T1FRV7_HELRO	T1F7I4	T1FRV7	Aa_trans domain-containing protein.	Uncharacterized protein.	0.482
T1FF98_HELRO	T1EGA7_HELRO	T1FF98	T1EGA7	Uncharacterized protein.	Uncharacterized protein.	0.454
T1FF98_HELRO	T1G6Z1_HELRO	T1FF98	T1G6Z1	Uncharacterized protein.	Uncharacterized protein.	0.454
T1FF98_HELRO	T1G9I8_HELRO	T1FF98	T1G9I8	Uncharacterized protein.	Uncharacterized protein.	0.454