(41 nodes) Regulation of binding network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1G091_HELRO	C2H2-type domain-containing protein. (140 aa)
	T1F8K4_HELRO	Uncharacterized protein. (202 aa)
	T1F7H4_HELRO	Uncharacterized protein. (293 aa)
	T1F6R0_HELRO	Uncharacterized protein. (143 aa)
	T1F197_HELRO	Uncharacterized protein. (703 aa)
	T1EY65_HELRO	Uncharacterized protein. (313 aa)
	T1ERI8_HELRO	ANK_REP_REGION domain-containing protein. (407 aa)
	T1EQM2_HELRO	WAPL domain-containing protein. (597 aa)
	T1EPN3_HELRO	Uncharacterized protein. (132 aa)
	T1EJX7_HELRO	Uncharacterized protein. (64 aa)
	T1EJT4_HELRO	Uncharacterized protein. (103 aa)
	T1EI62_HELRO	Uncharacterized protein. (158 aa)
	T1EHM6_HELRO	Homeobox domain-containing protein. (70 aa)
	T1EF08_HELRO	HTH cro/C1-type domain-containing protein. (147 aa)
	T1EDV5_HELRO	Helicase ATP-binding domain-containing protein. (761 aa)
	T1EDG8_HELRO	Protein kinase domain-containing protein. (348 aa)
	T1G0F9_HELRO	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (376 aa)
	T1G1F5_HELRO	MIT domain-containing protein. (241 aa)
	T1G3J4_HELRO	Uncharacterized protein. (342 aa)
	T1G1Y0_HELRO	Histone-lysine N-methyltransferase, H3 lysine-79 specific. (408 aa)
	T1G3E7_HELRO	G-patch domain-containing protein. (185 aa)
	T1FUX0_HELRO	Uncharacterized protein. (312 aa)
	T1FVQ3_HELRO	Uncharacterized protein. (745 aa)
	T1FWB1_HELRO	VPS10 domain-containing protein. (2037 aa)
	T1FWI0_HELRO	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
	T1FY63_HELRO	Histone-lysine N-methyltransferase, H3 lysine-79 specific. (258 aa)
	T1FZP7_HELRO	Uncharacterized protein. (108 aa)
	T1FIS4_HELRO	Sortilin-Vps10 domain-containing protein. (246 aa)
	T1FG77_HELRO	ANK_REP_REGION domain-containing protein. (704 aa)
	T1FF04_HELRO	PID domain-containing protein. (198 aa)
	T1F8M6_HELRO	Homeobox domain-containing protein. (251 aa)
	T1FJ71_HELRO	Protein kinase domain-containing protein. (317 aa)
	T1FNI7_HELRO	TFIIB-type domain-containing protein. (321 aa)
	T1FNW9_HELRO	Nefa_Nip30_N domain-containing protein. (296 aa)
	T1FPE6_HELRO	PL48 domain-containing protein. (1047 aa)
	T1FPX7_HELRO	WAPL domain-containing protein. (450 aa)
	T1FR78_HELRO	Uncharacterized protein. (675 aa)
	T1G996_HELRO	HTH La-type RNA-binding domain-containing protein. (391 aa)
	T1G5B4_HELRO	RING-type domain-containing protein. (222 aa)
	T1G4L9_HELRO	RING-type domain-containing protein. (201 aa)
	T1G478_HELRO	TFIIB-type domain-containing protein. (317 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EDV5_HELRO	T1F7H4_HELRO	T1EDV5	T1F7H4	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.913
T1EDV5_HELRO	T1FNI7_HELRO	T1EDV5	T1FNI7	Helicase ATP-binding domain-containing protein.	TFIIB-type domain-containing protein.	0.913
T1EDV5_HELRO	T1FZP7_HELRO	T1EDV5	T1FZP7	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.840
T1EDV5_HELRO	T1G478_HELRO	T1EDV5	T1G478	Helicase ATP-binding domain-containing protein.	TFIIB-type domain-containing protein.	0.913
T1EF08_HELRO	T1G091_HELRO	T1EF08	T1G091	HTH cro/C1-type domain-containing protein.	C2H2-type domain-containing protein.	0.416
T1EJT4_HELRO	T1FIS4_HELRO	T1EJT4	T1FIS4	Uncharacterized protein.	Sortilin-Vps10 domain-containing protein.	0.460
T1EJT4_HELRO	T1FWB1_HELRO	T1EJT4	T1FWB1	Uncharacterized protein.	VPS10 domain-containing protein.	0.460
T1EPN3_HELRO	T1F8K4_HELRO	T1EPN3	T1F8K4	Uncharacterized protein.	Uncharacterized protein.	0.743
T1ERI8_HELRO	T1G3J4_HELRO	T1ERI8	T1G3J4	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.494
T1F6R0_HELRO	T1FG77_HELRO	T1F6R0	T1FG77	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.970
T1F7H4_HELRO	T1EDV5_HELRO	T1F7H4	T1EDV5	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.913
T1F7H4_HELRO	T1FNI7_HELRO	T1F7H4	T1FNI7	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.901
T1F7H4_HELRO	T1FZP7_HELRO	T1F7H4	T1FZP7	Uncharacterized protein.	Uncharacterized protein.	0.855
T1F7H4_HELRO	T1G478_HELRO	T1F7H4	T1G478	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.900
T1F8K4_HELRO	T1EPN3_HELRO	T1F8K4	T1EPN3	Uncharacterized protein.	Uncharacterized protein.	0.743
T1FF04_HELRO	T1FIS4_HELRO	T1FF04	T1FIS4	PID domain-containing protein.	Sortilin-Vps10 domain-containing protein.	0.467
T1FF04_HELRO	T1FR78_HELRO	T1FF04	T1FR78	PID domain-containing protein.	Uncharacterized protein.	0.617
T1FF04_HELRO	T1FWB1_HELRO	T1FF04	T1FWB1	PID domain-containing protein.	VPS10 domain-containing protein.	0.467
T1FG77_HELRO	T1F6R0_HELRO	T1FG77	T1F6R0	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.970
T1FIS4_HELRO	T1EJT4_HELRO	T1FIS4	T1EJT4	Sortilin-Vps10 domain-containing protein.	Uncharacterized protein.	0.460