45 items (Helobdella robusta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1FRM4_HELRO	Uncharacterized protein. (1663 aa)
	T1FS99_HELRO	Uncharacterized protein. (1621 aa)
	T1FSA4_HELRO	Uncharacterized protein. (829 aa)
	T1FVH0_HELRO	Uncharacterized protein. (1066 aa)
	Syt4	Synaptotagmin 4. (335 aa)
	Syt7e	Synaptotagmin 7e. (274 aa)
	Syt45	Synaptotagmin 45. (282 aa)
	Syt7a	Synaptotagmin 7a. (338 aa)
	Syt46	Synaptotagmin 46. (209 aa)
	T1FZ87_HELRO	Uncharacterized protein. (269 aa)
	T1G0C8_HELRO	Uncharacterized protein. (583 aa)
	T1G0J6_HELRO	Uncharacterized protein. (1018 aa)
	T1G0R3_HELRO	Uncharacterized protein. (1734 aa)
	Syt15a	Synaptotagmin 15a. (298 aa)
	T1G347_HELRO	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (475 aa)
	Syt1e	Synaptotagmin 1e. (366 aa)
	Syt1a	Synaptotagmin 1a. (360 aa)
	T1G4V0_HELRO	Non-specific serine/threonine protein kinase. (523 aa)
	Syt1b	Synaptotagmin 1b. (243 aa)
	T1G6Y7_HELRO	Kinase; Belongs to the inositol phosphokinase (IPK) family. (287 aa)
	Syt7b	Synaptotagmin 7b. (286 aa)
	Syt7c	Synaptotagmin 7c. (272 aa)
	T1G811_HELRO	Uncharacterized protein. (545 aa)
	T1G825_HELRO	C2 domain-containing protein. (533 aa)
	T1G8C2_HELRO	Uncharacterized protein. (176 aa)
	Syt7d	Synaptotagmin 7d. (286 aa)
	T1G8Q7_HELRO	RR_TM4-6 domain-containing protein. (161 aa)
	T1EES3_HELRO	Uncharacterized protein. (175 aa)
	T1EF46_HELRO	Uncharacterized protein. (402 aa)
	T1EFH8_HELRO	Non-specific serine/threonine protein kinase. (537 aa)
	T1EGH2_HELRO	Uncharacterized protein. (217 aa)
	T1EKJ5_HELRO	VWFA domain-containing protein. (259 aa)
	Syt7f	Synaptotagmin 7f. (246 aa)
	T1ELQ5_HELRO	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (498 aa)
	Syt1c	Synaptotagmin 1c. (247 aa)
	T1EQQ3_HELRO	Kinase; Belongs to the inositol phosphokinase (IPK) family. (330 aa)
	T1ES19_HELRO	Uncharacterized protein. (170 aa)
	Syt1d	Synaptotagmin 1d. (358 aa)
	T1EU74_HELRO	Uncharacterized protein. (1226 aa)
	T1EZD9_HELRO	C2 domain-containing protein. (201 aa)
	Syt15b	Synaptotagmin 15b. (257 aa)
	T1F2Z9_HELRO	Uncharacterized protein. (305 aa)
	T1FMN3_HELRO	Uncharacterized protein. (454 aa)
	T1FNW1_HELRO	RING-type domain-containing protein. (314 aa)
	T1FNZ6_HELRO	Uncharacterized protein. (552 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Syt1a	Syt4	T1G4M6	T1FXJ4	Synaptotagmin 1a.	Synaptotagmin 4.	0.712
Syt1b	Syt4	T1G633	T1FXJ4	Synaptotagmin 1b.	Synaptotagmin 4.	0.712
Syt1c	Syt4	T1EMC2	T1FXJ4	Synaptotagmin 1c.	Synaptotagmin 4.	0.712
Syt1d	Syt4	T1ETY8	T1FXJ4	Synaptotagmin 1d.	Synaptotagmin 4.	0.712
Syt1e	Syt4	T1G3E0	T1FXJ4	Synaptotagmin 1e.	Synaptotagmin 4.	0.712
Syt4	Syt1a	T1FXJ4	T1G4M6	Synaptotagmin 4.	Synaptotagmin 1a.	0.712
Syt4	Syt1b	T1FXJ4	T1G633	Synaptotagmin 4.	Synaptotagmin 1b.	0.712
Syt4	Syt1c	T1FXJ4	T1EMC2	Synaptotagmin 4.	Synaptotagmin 1c.	0.712
Syt4	Syt1d	T1FXJ4	T1ETY8	Synaptotagmin 4.	Synaptotagmin 1d.	0.712
Syt4	Syt1e	T1FXJ4	T1G3E0	Synaptotagmin 4.	Synaptotagmin 1e.	0.712
Syt4	Syt45	T1FXJ4	T1FYC7	Synaptotagmin 4.	Synaptotagmin 45.	0.712
Syt45	Syt4	T1FYC7	T1FXJ4	Synaptotagmin 45.	Synaptotagmin 4.	0.712
T1EFH8_HELRO	T1ELQ5_HELRO	T1EFH8	T1ELQ5	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.901
T1EFH8_HELRO	T1G4V0_HELRO	T1EFH8	T1G4V0	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.901
T1ELQ5_HELRO	T1EFH8_HELRO	T1ELQ5	T1EFH8	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.901
T1ELQ5_HELRO	T1G4V0_HELRO	T1ELQ5	T1G4V0	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.901
T1EQQ3_HELRO	T1G6Y7_HELRO	T1EQQ3	T1G6Y7	Kinase; Belongs to the inositol phosphokinase (IPK) family.	Kinase; Belongs to the inositol phosphokinase (IPK) family.	0.904
T1EU74_HELRO	T1FS99_HELRO	T1EU74	T1FS99	Uncharacterized protein.	Uncharacterized protein.	0.442
T1FRM4_HELRO	T1G0J6_HELRO	T1FRM4	T1G0J6	Uncharacterized protein.	Uncharacterized protein.	0.937
T1FRM4_HELRO	T1G8Q7_HELRO	T1FRM4	T1G8Q7	Uncharacterized protein.	RR_TM4-6 domain-containing protein.	0.695