(21 nodes) Protein K63-linked ubiquitination network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1G4B0_HELRO	MATH domain-containing protein. (189 aa)
	T1EF85_HELRO	UBIQUITIN_CONJUGAT_2 domain-containing protein. (486 aa)
	T1EFA0_HELRO	Uncharacterized protein. (2023 aa)
	T1ESA8_HELRO	TRAF-type domain-containing protein. (248 aa)
	T1ETU2_HELRO	Uncharacterized protein. (479 aa)
	T1EZ91_HELRO	RING-type domain-containing protein. (700 aa)
	T1EZN7_HELRO	Uncharacterized protein. (1778 aa)
	T1F3K7_HELRO	Uncharacterized protein. (566 aa)
	T1FF55_HELRO	Uncharacterized protein. (686 aa)
	T1FML1_HELRO	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	T1FMW4_HELRO	UBIQUITIN_CONJUGAT_2 domain-containing protein. (139 aa)
	T1FNW4_HELRO	Uncharacterized protein. (516 aa)
	T1FSX2_HELRO	Uncharacterized protein. (544 aa)
	T1FUK2_HELRO	Uncharacterized protein. (1876 aa)
	T1FV68_HELRO	Uncharacterized protein. (1262 aa)
	T1FVQ3_HELRO	Uncharacterized protein. (745 aa)
	T1FW59_HELRO	Uncharacterized protein. (503 aa)
	T1FYQ4_HELRO	MATH domain-containing protein. (207 aa)
	T1FZQ3_HELRO	RBR-type E3 ubiquitin transferase. (464 aa)
	T1G162_HELRO	Uncharacterized protein. (207 aa)
	T1G293_HELRO	MATH domain-containing protein. (195 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EF85_HELRO	T1FML1_HELRO	T1EF85	T1FML1	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.569
T1EF85_HELRO	T1FMW4_HELRO	T1EF85	T1FMW4	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.786
T1EF85_HELRO	T1FSX2_HELRO	T1EF85	T1FSX2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.992
T1ESA8_HELRO	T1FML1_HELRO	T1ESA8	T1FML1	TRAF-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.531
T1ESA8_HELRO	T1FMW4_HELRO	T1ESA8	T1FMW4	TRAF-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.534
T1ESA8_HELRO	T1FVQ3_HELRO	T1ESA8	T1FVQ3	TRAF-type domain-containing protein.	Uncharacterized protein.	0.862
T1ESA8_HELRO	T1G293_HELRO	T1ESA8	T1G293	TRAF-type domain-containing protein.	MATH domain-containing protein.	0.696
T1FML1_HELRO	T1EF85_HELRO	T1FML1	T1EF85	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.569
T1FML1_HELRO	T1ESA8_HELRO	T1FML1	T1ESA8	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	TRAF-type domain-containing protein.	0.531
T1FML1_HELRO	T1FMW4_HELRO	T1FML1	T1FMW4	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.999
T1FML1_HELRO	T1FSX2_HELRO	T1FML1	T1FSX2	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.569
T1FML1_HELRO	T1FVQ3_HELRO	T1FML1	T1FVQ3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.998
T1FML1_HELRO	T1FYQ4_HELRO	T1FML1	T1FYQ4	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	MATH domain-containing protein.	0.531
T1FML1_HELRO	T1FZQ3_HELRO	T1FML1	T1FZQ3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RBR-type E3 ubiquitin transferase.	0.421
T1FML1_HELRO	T1G293_HELRO	T1FML1	T1G293	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	MATH domain-containing protein.	0.743
T1FML1_HELRO	T1G4B0_HELRO	T1FML1	T1G4B0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	MATH domain-containing protein.	0.531
T1FMW4_HELRO	T1EF85_HELRO	T1FMW4	T1EF85	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.786
T1FMW4_HELRO	T1ESA8_HELRO	T1FMW4	T1ESA8	UBIQUITIN_CONJUGAT_2 domain-containing protein.	TRAF-type domain-containing protein.	0.534
T1FMW4_HELRO	T1FML1_HELRO	T1FMW4	T1FML1	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.999
T1FMW4_HELRO	T1FSX2_HELRO	T1FMW4	T1FSX2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.786