(7 nodes) Golgi to lysosome transport network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1EGE1_HELRO	Sortilin. (618 aa)
	T1EZX5_HELRO	FYVE-type domain-containing protein. (605 aa)
	T1F073_HELRO	ANK_REP_REGION domain-containing protein. (387 aa)
	T1F074_HELRO	ANK_REP_REGION domain-containing protein. (319 aa)
	T1F076_HELRO	ANK_REP_REGION domain-containing protein. (173 aa)
	T1F077_HELRO	Uncharacterized protein. (130 aa)
	T1FRZ4_HELRO	Uncharacterized protein. (408 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EZX5_HELRO	T1F073_HELRO	T1EZX5	T1F073	FYVE-type domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.530
T1EZX5_HELRO	T1F074_HELRO	T1EZX5	T1F074	FYVE-type domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.530
T1EZX5_HELRO	T1F076_HELRO	T1EZX5	T1F076	FYVE-type domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.530
T1EZX5_HELRO	T1F077_HELRO	T1EZX5	T1F077	FYVE-type domain-containing protein.	Uncharacterized protein.	0.530
T1EZX5_HELRO	T1FRZ4_HELRO	T1EZX5	T1FRZ4	FYVE-type domain-containing protein.	Uncharacterized protein.	0.527
T1F073_HELRO	T1EZX5_HELRO	T1F073	T1EZX5	ANK_REP_REGION domain-containing protein.	FYVE-type domain-containing protein.	0.530
T1F073_HELRO	T1FRZ4_HELRO	T1F073	T1FRZ4	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.937
T1F074_HELRO	T1EZX5_HELRO	T1F074	T1EZX5	ANK_REP_REGION domain-containing protein.	FYVE-type domain-containing protein.	0.530
T1F076_HELRO	T1EZX5_HELRO	T1F076	T1EZX5	ANK_REP_REGION domain-containing protein.	FYVE-type domain-containing protein.	0.530
T1F076_HELRO	T1F077_HELRO	T1F076	T1F077	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.401
T1F077_HELRO	T1EZX5_HELRO	T1F077	T1EZX5	Uncharacterized protein.	FYVE-type domain-containing protein.	0.530
T1F077_HELRO	T1F076_HELRO	T1F077	T1F076	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.401
T1FRZ4_HELRO	T1EZX5_HELRO	T1FRZ4	T1EZX5	Uncharacterized protein.	FYVE-type domain-containing protein.	0.527
T1FRZ4_HELRO	T1F073_HELRO	T1FRZ4	T1F073	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.937