5 items (Helobdella robusta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1ELS3_HELRO	PIPK domain-containing protein. (413 aa)
	T1EXC4_HELRO	Vps5 domain-containing protein. (185 aa)
	T1FPB9_HELRO	PX domain-containing protein. (452 aa)
	T1FRD6_HELRO	PX domain-containing protein. (283 aa)
	T1G5I9_HELRO	PIPK domain-containing protein. (403 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1ELS3_HELRO	T1G5I9_HELRO	T1ELS3	T1G5I9	PIPK domain-containing protein.	PIPK domain-containing protein.	0.902
T1EXC4_HELRO	T1FPB9_HELRO	T1EXC4	T1FPB9	Vps5 domain-containing protein.	PX domain-containing protein.	0.938
T1EXC4_HELRO	T1FRD6_HELRO	T1EXC4	T1FRD6	Vps5 domain-containing protein.	PX domain-containing protein.	0.520
T1FPB9_HELRO	T1EXC4_HELRO	T1FPB9	T1EXC4	PX domain-containing protein.	Vps5 domain-containing protein.	0.938
T1FPB9_HELRO	T1FRD6_HELRO	T1FPB9	T1FRD6	PX domain-containing protein.	PX domain-containing protein.	0.928
T1FRD6_HELRO	T1EXC4_HELRO	T1FRD6	T1EXC4	PX domain-containing protein.	Vps5 domain-containing protein.	0.520
T1FRD6_HELRO	T1FPB9_HELRO	T1FRD6	T1FPB9	PX domain-containing protein.	PX domain-containing protein.	0.928
T1G5I9_HELRO	T1ELS3_HELRO	T1G5I9	T1ELS3	PIPK domain-containing protein.	PIPK domain-containing protein.	0.902