33 items (Helobdella robusta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1ED14_HELRO	Suf domain-containing protein. (844 aa)
	T1EDF2_HELRO	Uncharacterized protein. (356 aa)
	T1EDM8_HELRO	SKIP_SNW domain-containing protein. (549 aa)
	T1EDM9_HELRO	Small nuclear ribonucleoprotein Sm D3. (137 aa)
	T1EDY3_HELRO	Tr-type G domain-containing protein. (977 aa)
	T1EEI0_HELRO	Uncharacterized protein. (903 aa)
	T1EFG2_HELRO	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (141 aa)
	T1EFY0_HELRO	Matrin-type domain-containing protein. (274 aa)
	T1EIZ3_HELRO	C3H1-type domain-containing protein. (229 aa)
	T1EJW1_HELRO	SH2 domain-containing protein. (73 aa)
	T1EKG9_HELRO	FHA domain-containing protein. (163 aa)
	T1ELX6_HELRO	Uncharacterized protein; Belongs to the DEAD box helicase family. (323 aa)
	T1EMG5_HELRO	SFM domain-containing protein. (356 aa)
	T1F081_HELRO	Uncharacterized protein. (187 aa)
	T1F6X2_HELRO	FHA domain-containing protein. (235 aa)
	T1F7G2_HELRO	G-patch domain-containing protein. (120 aa)
	T1F868_HELRO	HA2 domain-containing protein. (635 aa)
	T1F8E0_HELRO	Uncharacterized protein. (1010 aa)
	T1FMY6_HELRO	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (451 aa)
	T1FN79_HELRO	Uncharacterized protein. (376 aa)
	T1FNA5_HELRO	Uncharacterized protein. (676 aa)
	T1FNA9_HELRO	SFM domain-containing protein. (357 aa)
	T1FNP7_HELRO	MFAP1 domain-containing protein. (468 aa)
	T1FNW4_HELRO	Uncharacterized protein. (516 aa)
	T1FNY6_HELRO	Uncharacterized protein. (625 aa)
	T1FQ54_HELRO	Uncharacterized protein. (502 aa)
	T1FQY2_HELRO	PPIase cyclophilin-type domain-containing protein. (563 aa)
	T1FSP3_HELRO	Uncharacterized protein. (402 aa)
	T1FYM9_HELRO	Uncharacterized protein. (190 aa)
	T1G1Z4_HELRO	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (127 aa)
	T1G8X2_HELRO	Uncharacterized protein. (428 aa)
	T1G973_HELRO	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (169 aa)
	T1G9M6_HELRO	Uncharacterized protein; Belongs to the DEAD box helicase family. (401 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1ED14_HELRO	T1EDF2_HELRO	T1ED14	T1EDF2	Suf domain-containing protein.	Uncharacterized protein.	0.780
T1ED14_HELRO	T1EDM8_HELRO	T1ED14	T1EDM8	Suf domain-containing protein.	SKIP_SNW domain-containing protein.	0.999
T1ED14_HELRO	T1EDM9_HELRO	T1ED14	T1EDM9	Suf domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.951
T1ED14_HELRO	T1EDY3_HELRO	T1ED14	T1EDY3	Suf domain-containing protein.	Tr-type G domain-containing protein.	0.998
T1ED14_HELRO	T1EEI0_HELRO	T1ED14	T1EEI0	Suf domain-containing protein.	Uncharacterized protein.	0.967
T1ED14_HELRO	T1EFY0_HELRO	T1ED14	T1EFY0	Suf domain-containing protein.	Matrin-type domain-containing protein.	0.965
T1ED14_HELRO	T1EIZ3_HELRO	T1ED14	T1EIZ3	Suf domain-containing protein.	C3H1-type domain-containing protein.	0.999
T1ED14_HELRO	T1EJW1_HELRO	T1ED14	T1EJW1	Suf domain-containing protein.	SH2 domain-containing protein.	0.917
T1ED14_HELRO	T1EKG9_HELRO	T1ED14	T1EKG9	Suf domain-containing protein.	FHA domain-containing protein.	0.806
T1ED14_HELRO	T1ELX6_HELRO	T1ED14	T1ELX6	Suf domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.727
T1ED14_HELRO	T1EMG5_HELRO	T1ED14	T1EMG5	Suf domain-containing protein.	SFM domain-containing protein.	0.712
T1ED14_HELRO	T1F081_HELRO	T1ED14	T1F081	Suf domain-containing protein.	Uncharacterized protein.	0.907
T1ED14_HELRO	T1F6X2_HELRO	T1ED14	T1F6X2	Suf domain-containing protein.	FHA domain-containing protein.	0.806
T1ED14_HELRO	T1F7G2_HELRO	T1ED14	T1F7G2	Suf domain-containing protein.	G-patch domain-containing protein.	0.933
T1ED14_HELRO	T1F868_HELRO	T1ED14	T1F868	Suf domain-containing protein.	HA2 domain-containing protein.	0.907
T1ED14_HELRO	T1FMY6_HELRO	T1ED14	T1FMY6	Suf domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.585
T1ED14_HELRO	T1FN79_HELRO	T1ED14	T1FN79	Suf domain-containing protein.	Uncharacterized protein.	0.929
T1ED14_HELRO	T1FNA5_HELRO	T1ED14	T1FNA5	Suf domain-containing protein.	Uncharacterized protein.	0.999
T1ED14_HELRO	T1FNA9_HELRO	T1ED14	T1FNA9	Suf domain-containing protein.	SFM domain-containing protein.	0.712
T1ED14_HELRO	T1FNP7_HELRO	T1ED14	T1FNP7	Suf domain-containing protein.	MFAP1 domain-containing protein.	0.831