(18 nodes) Midbody network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1G3X3_HELRO	Uncharacterized protein. (180 aa)
	T1FUH3_HELRO	INCENP_ARK-bind domain-containing protein. (1692 aa)
	T1FMZ0_HELRO	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	T1FQS9_HELRO	Uncharacterized protein. (1019 aa)
	T1FTF3_HELRO	Uncharacterized protein. (784 aa)
	T1F3Z6_HELRO	Doublecortin domain-containing protein. (1246 aa)
	T1ED79_HELRO	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	T1EGV0_HELRO	Uncharacterized protein. (179 aa)
	T1F5J4_HELRO	Uncharacterized protein. (377 aa)
	T1FCF8_HELRO	Rho-GAP domain-containing protein. (447 aa)
	T1FGI7_HELRO	Uncharacterized protein. (153 aa)
	T1FJ71_HELRO	Protein kinase domain-containing protein. (317 aa)
	T1EFU3_HELRO	UBIQUITIN_CONJUGAT_2 domain-containing protein. (838 aa)
	T1EEA5_HELRO	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (380 aa)
	T1EE47_HELRO	CS domain-containing protein. (370 aa)
	T1EDZ3_HELRO	Helicase ATP-binding domain-containing protein. (703 aa)
	T1G8V5_HELRO	Uncharacterized protein. (454 aa)
	T1G0P6_HELRO	Uncharacterized protein. (118 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EE47_HELRO	T1F5J4_HELRO	T1EE47	T1F5J4	CS domain-containing protein.	Uncharacterized protein.	0.717
T1EE47_HELRO	T1FUH3_HELRO	T1EE47	T1FUH3	CS domain-containing protein.	INCENP_ARK-bind domain-containing protein.	0.787
T1EEA5_HELRO	T1EFU3_HELRO	T1EEA5	T1EFU3	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.557
T1EFU3_HELRO	T1EEA5_HELRO	T1EFU3	T1EEA5	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.557
T1EFU3_HELRO	T1F5J4_HELRO	T1EFU3	T1F5J4	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.844
T1EFU3_HELRO	T1FUH3_HELRO	T1EFU3	T1FUH3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	INCENP_ARK-bind domain-containing protein.	0.844
T1EGV0_HELRO	T1G3X3_HELRO	T1EGV0	T1G3X3	Uncharacterized protein.	Uncharacterized protein.	0.902
T1EGV0_HELRO	T1G8V5_HELRO	T1EGV0	T1G8V5	Uncharacterized protein.	Uncharacterized protein.	0.902
T1F5J4_HELRO	T1EE47_HELRO	T1F5J4	T1EE47	Uncharacterized protein.	CS domain-containing protein.	0.717
T1F5J4_HELRO	T1EFU3_HELRO	T1F5J4	T1EFU3	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.844
T1F5J4_HELRO	T1FCF8_HELRO	T1F5J4	T1FCF8	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.743
T1F5J4_HELRO	T1FUH3_HELRO	T1F5J4	T1FUH3	Uncharacterized protein.	INCENP_ARK-bind domain-containing protein.	0.540
T1FCF8_HELRO	T1F5J4_HELRO	T1FCF8	T1F5J4	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.743
T1FCF8_HELRO	T1FMZ0_HELRO	T1FCF8	T1FMZ0	Rho-GAP domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.466
T1FCF8_HELRO	T1FUH3_HELRO	T1FCF8	T1FUH3	Rho-GAP domain-containing protein.	INCENP_ARK-bind domain-containing protein.	0.824
T1FMZ0_HELRO	T1FCF8_HELRO	T1FMZ0	T1FCF8	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Rho-GAP domain-containing protein.	0.466
T1FUH3_HELRO	T1EE47_HELRO	T1FUH3	T1EE47	INCENP_ARK-bind domain-containing protein.	CS domain-containing protein.	0.787
T1FUH3_HELRO	T1EFU3_HELRO	T1FUH3	T1EFU3	INCENP_ARK-bind domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.844
T1FUH3_HELRO	T1F5J4_HELRO	T1FUH3	T1F5J4	INCENP_ARK-bind domain-containing protein.	Uncharacterized protein.	0.540
T1FUH3_HELRO	T1FCF8_HELRO	T1FUH3	T1FCF8	INCENP_ARK-bind domain-containing protein.	Rho-GAP domain-containing protein.	0.824