(21 nodes) Phagocytic vesicle network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1FB12_HELRO	TIR domain-containing protein; Belongs to the Toll-like receptor family. (753 aa)
	T1ER84_HELRO	Uncharacterized protein. (273 aa)
	T1EM52_HELRO	Uncharacterized protein. (204 aa)
	T1EJH4_HELRO	TIR domain-containing protein. (125 aa)
	T1G7P0_HELRO	Coronin; Belongs to the WD repeat coronin family. (289 aa)
	T1EH51_HELRO	Uncharacterized protein. (148 aa)
	T1EG69_HELRO	WD_REPEATS_REGION domain-containing protein. (482 aa)
	T1EG68_HELRO	Coronin; Belongs to the WD repeat coronin family. (498 aa)
	T1EFM8_HELRO	Coronin; Belongs to the WD repeat coronin family. (403 aa)
	T1EHB0_HELRO	TIR domain-containing protein. (73 aa)
	T1G7N8_HELRO	DUF1899 domain-containing protein. (73 aa)
	T1G6S4_HELRO	Uncharacterized protein. (75 aa)
	T1G519_HELRO	Uncharacterized protein. (176 aa)
	T1G1L7_HELRO	Coronin; Belongs to the WD repeat coronin family. (410 aa)
	T1G0G1_HELRO	Coronin; Belongs to the WD repeat coronin family. (394 aa)
	T1FZ81_HELRO	Rho-GAP domain-containing protein. (692 aa)
	T1FWP6_HELRO	Uncharacterized protein. (269 aa)
	T1FRM5_HELRO	TIR domain-containing protein. (749 aa)
	T1FPJ1_HELRO	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (256 aa)
	T1FME2_HELRO	Uncharacterized protein. (209 aa)
	T1FM66_HELRO	Uncharacterized protein. (216 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EM52_HELRO	T1FM66_HELRO	T1EM52	T1FM66	Uncharacterized protein.	Uncharacterized protein.	0.556
T1EM52_HELRO	T1FME2_HELRO	T1EM52	T1FME2	Uncharacterized protein.	Uncharacterized protein.	0.498
T1EM52_HELRO	T1G6S4_HELRO	T1EM52	T1G6S4	Uncharacterized protein.	Uncharacterized protein.	0.679
T1ER84_HELRO	T1FWP6_HELRO	T1ER84	T1FWP6	Uncharacterized protein.	Uncharacterized protein.	0.900
T1FM66_HELRO	T1EM52_HELRO	T1FM66	T1EM52	Uncharacterized protein.	Uncharacterized protein.	0.556
T1FM66_HELRO	T1FME2_HELRO	T1FM66	T1FME2	Uncharacterized protein.	Uncharacterized protein.	0.551
T1FM66_HELRO	T1FZ81_HELRO	T1FM66	T1FZ81	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.474
T1FM66_HELRO	T1G6S4_HELRO	T1FM66	T1G6S4	Uncharacterized protein.	Uncharacterized protein.	0.569
T1FME2_HELRO	T1EM52_HELRO	T1FME2	T1EM52	Uncharacterized protein.	Uncharacterized protein.	0.498
T1FME2_HELRO	T1FM66_HELRO	T1FME2	T1FM66	Uncharacterized protein.	Uncharacterized protein.	0.551
T1FPJ1_HELRO	T1FZ81_HELRO	T1FPJ1	T1FZ81	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Rho-GAP domain-containing protein.	0.900
T1FWP6_HELRO	T1ER84_HELRO	T1FWP6	T1ER84	Uncharacterized protein.	Uncharacterized protein.	0.900
T1FZ81_HELRO	T1FM66_HELRO	T1FZ81	T1FM66	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.474
T1FZ81_HELRO	T1FPJ1_HELRO	T1FZ81	T1FPJ1	Rho-GAP domain-containing protein.	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.900
T1G6S4_HELRO	T1EM52_HELRO	T1G6S4	T1EM52	Uncharacterized protein.	Uncharacterized protein.	0.679
T1G6S4_HELRO	T1FM66_HELRO	T1G6S4	T1FM66	Uncharacterized protein.	Uncharacterized protein.	0.569