(9 nodes) Galactosyltransferase, C-terminal network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1G110_HELRO	Uncharacterized protein. (254 aa)
	T1G169_HELRO	Uncharacterized protein. (253 aa)
	T1G5S9_HELRO	Glyco_trans_2-like domain-containing protein. (549 aa)
	T1EGV1_HELRO	Uncharacterized protein. (228 aa)
	T1EI18_HELRO	Uncharacterized protein. (239 aa)
	T1G7A5_HELRO	Uncharacterized protein. (261 aa)
	T1FNS8_HELRO	Uncharacterized protein. (349 aa)
	T1G0T9_HELRO	Uncharacterized protein. (220 aa)
	T1G7R6_HELRO	Uncharacterized protein. (195 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1FNS8_HELRO	T1G169_HELRO	T1FNS8	T1G169	Uncharacterized protein.	Uncharacterized protein.	0.906
T1G0T9_HELRO	T1G169_HELRO	T1G0T9	T1G169	Uncharacterized protein.	Uncharacterized protein.	0.905
T1G0T9_HELRO	T1G7R6_HELRO	T1G0T9	T1G7R6	Uncharacterized protein.	Uncharacterized protein.	0.903
T1G169_HELRO	T1FNS8_HELRO	T1G169	T1FNS8	Uncharacterized protein.	Uncharacterized protein.	0.906
T1G169_HELRO	T1G0T9_HELRO	T1G169	T1G0T9	Uncharacterized protein.	Uncharacterized protein.	0.905
T1G169_HELRO	T1G7R6_HELRO	T1G169	T1G7R6	Uncharacterized protein.	Uncharacterized protein.	0.905
T1G7R6_HELRO	T1G0T9_HELRO	T1G7R6	T1G0T9	Uncharacterized protein.	Uncharacterized protein.	0.903
T1G7R6_HELRO	T1G169_HELRO	T1G7R6	T1G169	Uncharacterized protein.	Uncharacterized protein.	0.905