50 items (Helobdella robusta) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1G1P3_HELRO	Uncharacterized protein. (67 aa)
	T1ED10_HELRO	Uncharacterized protein. (1546 aa)
	T1ED87_HELRO	Uncharacterized protein. (578 aa)
	T1EDV5_HELRO	Helicase ATP-binding domain-containing protein. (761 aa)
	T1EEN1_HELRO	Uncharacterized protein. (1152 aa)
	T1EFI6_HELRO	RPOLA_N domain-containing protein. (1350 aa)
	T1EFT0_HELRO	Uncharacterized protein. (929 aa)
	T1ELG6_HELRO	Uncharacterized protein. (66 aa)
	T1ELK7_HELRO	Uncharacterized protein. (714 aa)
	T1EMA3_HELRO	Histone H2A; Belongs to the histone H2A family. (128 aa)
	T1EMC3_HELRO	WD_REPEATS_REGION domain-containing protein. (425 aa)
	T1EML4_HELRO	Histone H2B; Belongs to the histone H2B family. (120 aa)
	T1EVB4_HELRO	Uncharacterized protein. (293 aa)
	T1EX11_HELRO	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	T1F5Y5_HELRO	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (115 aa)
	T1F5Y6_HELRO	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (117 aa)
	T1F7C1_HELRO	TFIIS-type domain-containing protein. (161 aa)
	T1F8G8_HELRO	Uncharacterized protein. (356 aa)
	T1FAY9_HELRO	S1 motif domain-containing protein. (309 aa)
	T1FME1_HELRO	General transcription factor IIH subunit. (388 aa)
	T1FMV6_HELRO	Uncharacterized protein. (293 aa)
	T1FMY9_HELRO	MBD domain-containing protein. (239 aa)
	T1FN65_HELRO	Uncharacterized protein. (209 aa)
	T1FNJ3_HELRO	Histone H2B; Belongs to the histone H2B family. (123 aa)
	T1FNW1_HELRO	RING-type domain-containing protein. (314 aa)
	T1FP96_HELRO	Uncharacterized protein. (803 aa)
	T1FPI3_HELRO	Uncharacterized protein. (606 aa)
	T1FPK6_HELRO	Uncharacterized protein. (498 aa)
	T1FQ96_HELRO	Uncharacterized protein. (286 aa)
	T1FSS7_HELRO	Uncharacterized protein. (473 aa)
	T1FV13_HELRO	P66_CC domain-containing protein. (712 aa)
	T1FVB0_HELRO	P66_CC domain-containing protein. (773 aa)
	T1FXB7_HELRO	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1048 aa)
	T1FXD3_HELRO	Uncharacterized protein. (67 aa)
	T1FY50_HELRO	Uncharacterized protein. (207 aa)
	T1FZL1_HELRO	SprT-like domain-containing protein. (193 aa)
	T1FZW1_HELRO	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (447 aa)
	T1G0C7_HELRO	Histone domain-containing protein; Belongs to the histone H2B family. (69 aa)
	T1G0D3_HELRO	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	T1G1K9_HELRO	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
	T1G2S8_HELRO	RPOLD domain-containing protein. (341 aa)
	T1G3M0_HELRO	Histone H2B; Belongs to the histone H2B family. (64 aa)
	T1G3M1_HELRO	Histone H2B; Belongs to the histone H2B family. (49 aa)
	T1G436_HELRO	Uncharacterized protein. (77 aa)
	T1G5M3_HELRO	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	T1G671_HELRO	Uncharacterized protein. (196 aa)
	T1G6A2_HELRO	Uncharacterized protein. (126 aa)
	T1G7B3_HELRO	HMG box domain-containing protein. (284 aa)
	T1G7V9_HELRO	CYCLIN domain-containing protein; Belongs to the cyclin family. (233 aa)
	T1G8J7_HELRO	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1ED10_HELRO	T1EEN1_HELRO	T1ED10	T1EEN1	Uncharacterized protein.	Uncharacterized protein.	0.608
T1ED10_HELRO	T1EFI6_HELRO	T1ED10	T1EFI6	Uncharacterized protein.	RPOLA_N domain-containing protein.	0.445
T1ED10_HELRO	T1ELG6_HELRO	T1ED10	T1ELG6	Uncharacterized protein.	Uncharacterized protein.	0.487
T1ED10_HELRO	T1ELK7_HELRO	T1ED10	T1ELK7	Uncharacterized protein.	Uncharacterized protein.	0.445
T1ED10_HELRO	T1EMA3_HELRO	T1ED10	T1EMA3	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.540
T1ED10_HELRO	T1EMC3_HELRO	T1ED10	T1EMC3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.943
T1ED10_HELRO	T1EX11_HELRO	T1ED10	T1EX11	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.488
T1ED10_HELRO	T1F8G8_HELRO	T1ED10	T1F8G8	Uncharacterized protein.	Uncharacterized protein.	0.526
T1ED10_HELRO	T1FMY9_HELRO	T1ED10	T1FMY9	Uncharacterized protein.	MBD domain-containing protein.	0.907
T1ED10_HELRO	T1FN65_HELRO	T1ED10	T1FN65	Uncharacterized protein.	Uncharacterized protein.	0.471
T1ED10_HELRO	T1FP96_HELRO	T1ED10	T1FP96	Uncharacterized protein.	Uncharacterized protein.	0.926
T1ED10_HELRO	T1FQ96_HELRO	T1ED10	T1FQ96	Uncharacterized protein.	Uncharacterized protein.	0.420
T1ED10_HELRO	T1FV13_HELRO	T1ED10	T1FV13	Uncharacterized protein.	P66_CC domain-containing protein.	0.830
T1ED10_HELRO	T1FVB0_HELRO	T1ED10	T1FVB0	Uncharacterized protein.	P66_CC domain-containing protein.	0.830
T1ED10_HELRO	T1FXD3_HELRO	T1ED10	T1FXD3	Uncharacterized protein.	Uncharacterized protein.	0.468
T1ED10_HELRO	T1FY50_HELRO	T1ED10	T1FY50	Uncharacterized protein.	Uncharacterized protein.	0.471
T1ED10_HELRO	T1G1P3_HELRO	T1ED10	T1G1P3	Uncharacterized protein.	Uncharacterized protein.	0.468
T1ED10_HELRO	T1G2S8_HELRO	T1ED10	T1G2S8	Uncharacterized protein.	RPOLD domain-containing protein.	0.462
T1ED10_HELRO	T1G671_HELRO	T1ED10	T1G671	Uncharacterized protein.	Uncharacterized protein.	0.455
T1ED10_HELRO	T1G6A2_HELRO	T1ED10	T1G6A2	Uncharacterized protein.	Uncharacterized protein.	0.605