(47 nodes) Leucine-rich repeats, typical (most populated) subfamily network (Helobdella robusta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1EDH1_HELRO	Uncharacterized protein. (404 aa)
	T1EDI1_HELRO	Uncharacterized protein. (1432 aa)
	T1EED9_HELRO	Uncharacterized protein. (610 aa)
	T1EHE1_HELRO	Uncharacterized protein. (81 aa)
	T1EI05_HELRO	Uncharacterized protein. (275 aa)
	T1EJ93_HELRO	Uncharacterized protein. (195 aa)
	T1EJF0_HELRO	Uncharacterized protein. (135 aa)
	T1EKG7_HELRO	Uncharacterized protein. (253 aa)
	T1EQN5_HELRO	TIR domain-containing protein; Belongs to the Toll-like receptor family. (684 aa)
	T1EQW3_HELRO	COR domain-containing protein. (1401 aa)
	T1ERD7_HELRO	Uncharacterized protein. (571 aa)
	T1EWX9_HELRO	Uncharacterized protein. (434 aa)
	T1EXF9_HELRO	B3_4 domain-containing protein. (584 aa)
	T1EZI1_HELRO	Uncharacterized protein. (270 aa)
	T1F894_HELRO	LRRCT domain-containing protein. (760 aa)
	T1FB12_HELRO	TIR domain-containing protein; Belongs to the Toll-like receptor family. (753 aa)
	T1FG01_HELRO	Uncharacterized protein. (392 aa)
	T1FKH3_HELRO	Uncharacterized protein. (212 aa)
	T1FNL2_HELRO	Uncharacterized protein. (434 aa)
	T1FQ15_HELRO	Uncharacterized protein. (1119 aa)
	T1FRK9_HELRO	Uncharacterized protein. (1349 aa)
	T1FRM5_HELRO	TIR domain-containing protein. (749 aa)
	T1FRX5_HELRO	Calponin-homology (CH) domain-containing protein. (896 aa)
	T1FSE1_HELRO	Fibronectin type-III domain-containing protein. (896 aa)
	T1FST4_HELRO	TIR domain-containing protein; Belongs to the Toll-like receptor family. (673 aa)
	T1FTT3_HELRO	Uncharacterized protein. (1856 aa)
	T1FTY4_HELRO	Uncharacterized protein. (706 aa)
	T1FXG4_HELRO	Uncharacterized protein. (237 aa)
	T1FXQ1_HELRO	Uncharacterized protein. (232 aa)
	T1G0T0_HELRO	Uncharacterized protein. (636 aa)
	T1G0Y8_HELRO	Uncharacterized protein. (485 aa)
	T1G0Z8_HELRO	Uncharacterized protein. (270 aa)
	T1G1E9_HELRO	Ig-like domain-containing protein. (264 aa)
	T1G1H6_HELRO	Uncharacterized protein. (202 aa)
	T1G270_HELRO	Uncharacterized protein. (360 aa)
	T1G2D9_HELRO	LRRNT domain-containing protein. (257 aa)
	T1G2G7_HELRO	Uncharacterized protein. (516 aa)
	T1G3G1_HELRO	LRRNT domain-containing protein. (139 aa)
	T1G473_HELRO	Uncharacterized protein. (324 aa)
	T1G4S6_HELRO	Uncharacterized protein. (217 aa)
	T1G5V2_HELRO	Uncharacterized protein. (323 aa)
	T1G6D4_HELRO	Uncharacterized protein. (630 aa)
	T1G7B8_HELRO	Uncharacterized protein. (1330 aa)
	T1G7K1_HELRO	Uncharacterized protein. (189 aa)
	T1G8E7_HELRO	LRRNT domain-containing protein. (113 aa)
	T1G8K6_HELRO	Uncharacterized protein. (212 aa)
	T1G9A6_HELRO	Uncharacterized protein. (1255 aa)

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EDH1_HELRO	T1G270_HELRO	T1EDH1	T1G270	Uncharacterized protein.	Uncharacterized protein.	0.556
T1EDH1_HELRO	T1G2G7_HELRO	T1EDH1	T1G2G7	Uncharacterized protein.	Uncharacterized protein.	0.523
T1EDH1_HELRO	T1G7K1_HELRO	T1EDH1	T1G7K1	Uncharacterized protein.	Uncharacterized protein.	0.482
T1EED9_HELRO	T1G7K1_HELRO	T1EED9	T1G7K1	Uncharacterized protein.	Uncharacterized protein.	0.455
T1EKG7_HELRO	T1EXF9_HELRO	T1EKG7	T1EXF9	Uncharacterized protein.	B3_4 domain-containing protein.	0.431
T1EKG7_HELRO	T1FNL2_HELRO	T1EKG7	T1FNL2	Uncharacterized protein.	Uncharacterized protein.	0.524
T1EKG7_HELRO	T1FXG4_HELRO	T1EKG7	T1FXG4	Uncharacterized protein.	Uncharacterized protein.	0.512
T1EKG7_HELRO	T1G0Z8_HELRO	T1EKG7	T1G0Z8	Uncharacterized protein.	Uncharacterized protein.	0.488
T1EXF9_HELRO	T1EKG7_HELRO	T1EXF9	T1EKG7	B3_4 domain-containing protein.	Uncharacterized protein.	0.431
T1EXF9_HELRO	T1FXQ1_HELRO	T1EXF9	T1FXQ1	B3_4 domain-containing protein.	Uncharacterized protein.	0.449
T1EXF9_HELRO	T1G270_HELRO	T1EXF9	T1G270	B3_4 domain-containing protein.	Uncharacterized protein.	0.403
T1EXF9_HELRO	T1G2G7_HELRO	T1EXF9	T1G2G7	B3_4 domain-containing protein.	Uncharacterized protein.	0.436
T1EXF9_HELRO	T1G5V2_HELRO	T1EXF9	T1G5V2	B3_4 domain-containing protein.	Uncharacterized protein.	0.472
T1EXF9_HELRO	T1G6D4_HELRO	T1EXF9	T1G6D4	B3_4 domain-containing protein.	Uncharacterized protein.	0.410
T1FNL2_HELRO	T1EKG7_HELRO	T1FNL2	T1EKG7	Uncharacterized protein.	Uncharacterized protein.	0.524
T1FNL2_HELRO	T1FTY4_HELRO	T1FNL2	T1FTY4	Uncharacterized protein.	Uncharacterized protein.	0.543
T1FNL2_HELRO	T1FXQ1_HELRO	T1FNL2	T1FXQ1	Uncharacterized protein.	Uncharacterized protein.	0.548
T1FNL2_HELRO	T1G0Z8_HELRO	T1FNL2	T1G0Z8	Uncharacterized protein.	Uncharacterized protein.	0.577
T1FNL2_HELRO	T1G270_HELRO	T1FNL2	T1G270	Uncharacterized protein.	Uncharacterized protein.	0.528
T1FNL2_HELRO	T1G2G7_HELRO	T1FNL2	T1G2G7	Uncharacterized protein.	Uncharacterized protein.	0.548