30 items (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	ENSATEP00000001358	Small nuclear ribonucleoprotein Sm D2. (120 aa)
	ENSATEP00000003045	Survival of motor neuron 1, telomeric. (328 aa)
	ddx20	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. (796 aa)
	ENSATEP00000005337	Chloride channel, nucleotide-sensitive, 1A. (289 aa)
	LOC113151674	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	LOC113151674-2	Small nuclear ribonucleoprotein E. (92 aa)
	LOC113152948	Uncharacterized protein. (357 aa)
	prpf6	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (969 aa)
	prmt7	Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being r [...] (685 aa)
	prmt5	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (631 aa)
	prpf19	Pre-mRNA processing factor 19. (505 aa)
	ENSATEP00000014219	Spliceosome associated factor 3, U4/U6 recycling protein. (884 aa)
	snrpb	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	gemin2	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (280 aa)
	prpf3	PRP3 pre-mRNA processing factor 3 homolog (yeast). (698 aa)
	snrpc	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (148 aa)
	strap	Serine/threonine kinase receptor associated protein. (329 aa)
	prpf31	PRP31 pre-mRNA processing factor 31 homolog (yeast). (508 aa)
	ENSATEP00000032894	Small nuclear ribonucleoprotein polypeptide F. (93 aa)
	ENSATEP00000029779	Small nuclear ribonucleoprotein Sm D3. (140 aa)
	ENSATEP00000028783	Gem (nuclear organelle) associated protein 4. (1030 aa)
	gemin8	Gem (nuclear organelle) associated protein 8. (201 aa)
	lsm4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (152 aa)
	gemin6	Gem (nuclear organelle) associated protein 6. (179 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
	gemin5	Gem (nuclear organelle) associated protein 5. (1466 aa)
	gemin7	Gem (nuclear organelle) associated protein 7. (128 aa)
	lsm2	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
	ENSATEP00000014599	Pre-mRNA processing factor 8. (2335 aa)

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000001358	ENSATEP00000003045	ENSATEP00000001358	ENSATEP00000003045	Small nuclear ribonucleoprotein Sm D2.	Survival of motor neuron 1, telomeric.	0.986
ENSATEP00000001358	ENSATEP00000005337	ENSATEP00000001358	ENSATEP00000005337	Small nuclear ribonucleoprotein Sm D2.	Chloride channel, nucleotide-sensitive, 1A.	0.974
ENSATEP00000001358	ENSATEP00000014219	ENSATEP00000001358	ENSATEP00000014219	Small nuclear ribonucleoprotein Sm D2.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.495
ENSATEP00000001358	ENSATEP00000014599	ENSATEP00000001358	ENSATEP00000014599	Small nuclear ribonucleoprotein Sm D2.	Pre-mRNA processing factor 8.	0.997
ENSATEP00000001358	ENSATEP00000028783	ENSATEP00000001358	ENSATEP00000028783	Small nuclear ribonucleoprotein Sm D2.	Gem (nuclear organelle) associated protein 4.	0.771
ENSATEP00000001358	ENSATEP00000029779	ENSATEP00000001358	ENSATEP00000029779	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D3.	0.999
ENSATEP00000001358	ENSATEP00000032894	ENSATEP00000001358	ENSATEP00000032894	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein polypeptide F.	0.999
ENSATEP00000001358	LOC113151674	ENSATEP00000001358	ENSATEP00000007497	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
ENSATEP00000001358	LOC113151674-2	ENSATEP00000001358	ENSATEP00000007989	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E.	0.998
ENSATEP00000001358	LOC113152948	ENSATEP00000001358	ENSATEP00000007993	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.969
ENSATEP00000001358	ddx20	ENSATEP00000001358	ENSATEP00000004191	Small nuclear ribonucleoprotein Sm D2.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	0.827
ENSATEP00000001358	gemin2	ENSATEP00000001358	ENSATEP00000013797	Small nuclear ribonucleoprotein Sm D2.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.997
ENSATEP00000001358	gemin5	ENSATEP00000001358	ENSATEP00000019916	Small nuclear ribonucleoprotein Sm D2.	Gem (nuclear organelle) associated protein 5.	0.851
ENSATEP00000001358	gemin6	ENSATEP00000001358	ENSATEP00000020887	Small nuclear ribonucleoprotein Sm D2.	Gem (nuclear organelle) associated protein 6.	0.614
ENSATEP00000001358	gemin7	ENSATEP00000001358	ENSATEP00000018680	Small nuclear ribonucleoprotein Sm D2.	Gem (nuclear organelle) associated protein 7.	0.679
ENSATEP00000001358	gemin8	ENSATEP00000001358	ENSATEP00000026287	Small nuclear ribonucleoprotein Sm D2.	Gem (nuclear organelle) associated protein 8.	0.753
ENSATEP00000001358	lsm2	ENSATEP00000001358	ENSATEP00000016336	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
ENSATEP00000001358	lsm4	ENSATEP00000001358	ENSATEP00000023861	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.993
ENSATEP00000001358	prmt5	ENSATEP00000001358	ENSATEP00000011903	Small nuclear ribonucleoprotein Sm D2.	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.688
ENSATEP00000001358	prpf19	ENSATEP00000001358	ENSATEP00000012709	Small nuclear ribonucleoprotein Sm D2.	Pre-mRNA processing factor 19.	0.994