19 items (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snrpb	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	ENSATEP00000016610	Small nuclear ribonucleoprotein polypeptide A. (253 aa)
	ENSATEP00000017911	Uncharacterized protein. (57 aa)
	sf3b3	Splicing factor 3b, subunit 3. (1217 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
	sf3a2	Splicing factor 3a, subunit 2. (296 aa)
	sf3b6	Splicing factor 3b, subunit 6. (125 aa)
	sf3b1	Splicing factor 3b, subunit 1. (1314 aa)
	ENSATEP00000029779	Small nuclear ribonucleoprotein Sm D3. (140 aa)
	ENSATEP00000030753	Splicing factor 3a, subunit 1. (840 aa)
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	ENSATEP00000001358	Small nuclear ribonucleoprotein Sm D2. (120 aa)
	LOC113151674	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	LOC113151674-2	Small nuclear ribonucleoprotein E. (92 aa)
	phf5a	PHD finger protein 5A. (110 aa)
	phf5a-2	PHD finger-like domain-containing protein 5A. (110 aa)
	sf3a3	Splicing factor 3a, subunit 3. (501 aa)
	ENSATEP00000012737	HIV-1 Tat specific factor 1. (444 aa)
	sf3b5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000001358	ENSATEP00000012737	ENSATEP00000001358	ENSATEP00000012737	Small nuclear ribonucleoprotein Sm D2.	HIV-1 Tat specific factor 1.	0.888
ENSATEP00000001358	ENSATEP00000016610	ENSATEP00000001358	ENSATEP00000016610	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein polypeptide A.	0.998
ENSATEP00000001358	ENSATEP00000017911	ENSATEP00000001358	ENSATEP00000017911	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.924
ENSATEP00000001358	ENSATEP00000029779	ENSATEP00000001358	ENSATEP00000029779	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D3.	0.999
ENSATEP00000001358	ENSATEP00000030753	ENSATEP00000001358	ENSATEP00000030753	Small nuclear ribonucleoprotein Sm D2.	Splicing factor 3a, subunit 1.	0.985
ENSATEP00000001358	LOC113151674	ENSATEP00000001358	ENSATEP00000007497	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
ENSATEP00000001358	LOC113151674-2	ENSATEP00000001358	ENSATEP00000007989	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E.	0.998
ENSATEP00000001358	phf5a	ENSATEP00000001358	ENSATEP00000009240	Small nuclear ribonucleoprotein Sm D2.	PHD finger protein 5A.	0.982
ENSATEP00000001358	phf5a-2	ENSATEP00000001358	ENSATEP00000010594	Small nuclear ribonucleoprotein Sm D2.	PHD finger-like domain-containing protein 5A.	0.982
ENSATEP00000001358	sf3a2	ENSATEP00000001358	ENSATEP00000022253	Small nuclear ribonucleoprotein Sm D2.	Splicing factor 3a, subunit 2.	0.990
ENSATEP00000001358	sf3a3	ENSATEP00000001358	ENSATEP00000012605	Small nuclear ribonucleoprotein Sm D2.	Splicing factor 3a, subunit 3.	0.991
ENSATEP00000001358	sf3b1	ENSATEP00000001358	ENSATEP00000029692	Small nuclear ribonucleoprotein Sm D2.	Splicing factor 3b, subunit 1.	0.988
ENSATEP00000001358	sf3b3	ENSATEP00000001358	ENSATEP00000019703	Small nuclear ribonucleoprotein Sm D2.	Splicing factor 3b, subunit 3.	0.987
ENSATEP00000001358	sf3b5	ENSATEP00000001358	ENSATEP00000013926	Small nuclear ribonucleoprotein Sm D2.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.997
ENSATEP00000001358	sf3b6	ENSATEP00000001358	ENSATEP00000023881	Small nuclear ribonucleoprotein Sm D2.	Splicing factor 3b, subunit 6.	0.977
ENSATEP00000001358	snrpb	ENSATEP00000001358	ENSATEP00000014083	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein-associated protein.	0.996
ENSATEP00000001358	snrpd1	ENSATEP00000001358	ENSATEP00000020648	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
ENSATEP00000001358	snrpg	ENSATEP00000001358	ENSATEP00000033739	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein G.	0.999
ENSATEP00000012737	ENSATEP00000001358	ENSATEP00000012737	ENSATEP00000001358	HIV-1 Tat specific factor 1.	Small nuclear ribonucleoprotein Sm D2.	0.888
ENSATEP00000012737	ENSATEP00000016610	ENSATEP00000012737	ENSATEP00000016610	HIV-1 Tat specific factor 1.	Small nuclear ribonucleoprotein polypeptide A.	0.943