46 items (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	eftud2	Elongation factor Tu GTP binding domain containing 2. (971 aa)
	cwc27	CWC27 spliceosome associated cyclophilin. (481 aa)
	phf5a-2	PHD finger-like domain-containing protein 5A. (110 aa)
	SMU1	SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
	dhx16	DEAH (Asp-Glu-Ala-His) box polypeptide 16. (1050 aa)
	phf5a	PHD finger protein 5A. (110 aa)
	prpf6	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (969 aa)
	LOC113151674-2	Small nuclear ribonucleoprotein E. (92 aa)
	txnl4a	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
	LOC113151674	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	cwc22	CWC22 spliceosome associated protein homolog. (1004 aa)
	lsm3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
	prpf38a	Pre-mRNA processing factor 38A. (309 aa)
	prpf3	PRP3 pre-mRNA processing factor 3 homolog (yeast). (698 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (75 aa)
	prpf4	PRP4 pre-mRNA processing factor 4 homolog (yeast). (510 aa)
	rnf113a	Ring finger protein 113A. (321 aa)
	prpf31	PRP31 pre-mRNA processing factor 31 homolog (yeast). (508 aa)
	ENSATEP00000032894	Small nuclear ribonucleoprotein polypeptide F. (93 aa)
	snrnp200	Small nuclear ribonucleoprotein 200 (U5). (2136 aa)
	bud13	BUD13 homolog. (542 aa)
	ENSATEP00000030753	Splicing factor 3a, subunit 1. (840 aa)
	ENSATEP00000029779	Small nuclear ribonucleoprotein Sm D3. (140 aa)
	sf3b1	Splicing factor 3b, subunit 1. (1314 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (135 aa)
	mfap1	Microfibril associated protein 1. (438 aa)
	ENSATEP00000025112	Uncharacterized protein. (350 aa)
	ENSATEP00000024991	SMU1 DNA replication regulator and spliceosomal factor b. (505 aa)
	lsm4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (152 aa)
	sf3a2	Splicing factor 3a, subunit 2. (296 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
	sf3b3	Splicing factor 3b, subunit 3. (1217 aa)
	snu13	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	sf3b4	Splicing factor 3b, subunit 4. (403 aa)
	ENSATEP00000001358	Small nuclear ribonucleoprotein Sm D2. (120 aa)
	lsm6	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
	ENSATEP00000016610	Small nuclear ribonucleoprotein polypeptide A. (253 aa)
	lsm2	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
	sart1	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (770 aa)
	ENSATEP00000014599	Pre-mRNA processing factor 8. (2335 aa)
	snrpb	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	zmat2	Zinc finger, matrin-type 2. (207 aa)
	sf3b5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
	ENSATEP00000013423	Smad nuclear interacting protein. (356 aa)
	sf3a3	Splicing factor 3a, subunit 3. (501 aa)
	lsm7	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000001358	ENSATEP00000013423	ENSATEP00000001358	ENSATEP00000013423	Small nuclear ribonucleoprotein Sm D2.	Smad nuclear interacting protein.	0.932
ENSATEP00000001358	ENSATEP00000014599	ENSATEP00000001358	ENSATEP00000014599	Small nuclear ribonucleoprotein Sm D2.	Pre-mRNA processing factor 8.	0.997
ENSATEP00000001358	ENSATEP00000016610	ENSATEP00000001358	ENSATEP00000016610	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein polypeptide A.	0.998
ENSATEP00000001358	ENSATEP00000024991	ENSATEP00000001358	ENSATEP00000024991	Small nuclear ribonucleoprotein Sm D2.	SMU1 DNA replication regulator and spliceosomal factor b.	0.697
ENSATEP00000001358	ENSATEP00000025112	ENSATEP00000001358	ENSATEP00000025112	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.712
ENSATEP00000001358	ENSATEP00000029779	ENSATEP00000001358	ENSATEP00000029779	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D3.	0.999
ENSATEP00000001358	ENSATEP00000030753	ENSATEP00000001358	ENSATEP00000030753	Small nuclear ribonucleoprotein Sm D2.	Splicing factor 3a, subunit 1.	0.985
ENSATEP00000001358	ENSATEP00000032894	ENSATEP00000001358	ENSATEP00000032894	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein polypeptide F.	0.999
ENSATEP00000001358	LOC113151674	ENSATEP00000001358	ENSATEP00000007497	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
ENSATEP00000001358	LOC113151674-2	ENSATEP00000001358	ENSATEP00000007989	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E.	0.998
ENSATEP00000001358	LSM5	ENSATEP00000001358	ENSATEP00000029669	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.994
ENSATEP00000001358	LSM8	ENSATEP00000001358	ENSATEP00000034082	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
ENSATEP00000001358	SMU1	ENSATEP00000001358	ENSATEP00000010080	Small nuclear ribonucleoprotein Sm D2.	SMU1 DNA replication regulator and spliceosomal factor.	0.770
ENSATEP00000001358	bud13	ENSATEP00000001358	ENSATEP00000030779	Small nuclear ribonucleoprotein Sm D2.	BUD13 homolog.	0.926
ENSATEP00000001358	cwc22	ENSATEP00000001358	ENSATEP00000007332	Small nuclear ribonucleoprotein Sm D2.	CWC22 spliceosome associated protein homolog.	0.938
ENSATEP00000001358	cwc27	ENSATEP00000001358	ENSATEP00000010738	Small nuclear ribonucleoprotein Sm D2.	CWC27 spliceosome associated cyclophilin.	0.947
ENSATEP00000001358	dhx16	ENSATEP00000001358	ENSATEP00000009602	Small nuclear ribonucleoprotein Sm D2.	DEAH (Asp-Glu-Ala-His) box polypeptide 16.	0.946
ENSATEP00000001358	eftud2	ENSATEP00000001358	ENSATEP00000000721	Small nuclear ribonucleoprotein Sm D2.	Elongation factor Tu GTP binding domain containing 2.	0.998
ENSATEP00000001358	lsm2	ENSATEP00000001358	ENSATEP00000016336	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
ENSATEP00000001358	lsm3	ENSATEP00000001358	ENSATEP00000007322	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990