64 items (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sf3a2	Splicing factor 3a, subunit 2. (296 aa)
	DDX41	DEAD-box helicase 41. (614 aa)
	ENSATEP00000004915	PPIase cyclophilin-type domain-containing protein. (54 aa)
	dhx38	DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1253 aa)
	bcas2	BCAS2 pre-mRNA processing factor. (225 aa)
	lsm3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
	cwc22	CWC22 spliceosome associated protein homolog. (1004 aa)
	LOC113151674	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	dhx35	DEAH-box helicase 35. (699 aa)
	LOC113151674-2	Small nuclear ribonucleoprotein E. (92 aa)
	prpf6	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (969 aa)
	ppie	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
	ENSATEP00000010592	Peptidylprolyl isomerase (cyclophilin)-like 2. (503 aa)
	cwc27	CWC27 spliceosome associated cyclophilin. (481 aa)
	ppwd1	Peptidylprolyl isomerase domain and WD repeat containing 1. (626 aa)
	srrm1	Serine/arginine repetitive matrix 1. (860 aa)
	dhx8	DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1212 aa)
	syf2	SYF2 pre-mRNA-splicing factor. (238 aa)
	rbm22	RNA binding motif protein 22. (427 aa)
	lsm7	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
	ENSATEP00000012505	Heterogeneous nuclear ribonucleoprotein R. (620 aa)
	sf3a3	Splicing factor 3a, subunit 3. (501 aa)
	prpf19	Pre-mRNA processing factor 19. (505 aa)
	ENSATEP00000013028	Heterogeneous nuclear ribonucleoprotein M. (663 aa)
	ENSATEP00000013179	DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1149 aa)
	ENSATEP00000013641	ISY1 splicing factor homolog. (229 aa)
	ENSATEP00000013690	Pinin, desmosome associated protein. (740 aa)
	snrpb	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	plrg1	Pleiotropic regulator 1. (512 aa)
	ENSATEP00000014599	Pre-mRNA processing factor 8. (2335 aa)
	sart1	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (770 aa)
	aqr	Aquarius intron-binding spliceosomal factor. (1469 aa)
	ppil1	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
	ENSATEP00000016279	Cell division cycle 40 homolog (S. cerevisiae). (609 aa)
	lsm2	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
	ENSATEP00000016610	Small nuclear ribonucleoprotein polypeptide A. (253 aa)
	zcchc8	Zinc finger, CCHC domain containing 8. (813 aa)
	WDR25	WD repeat domain 25. (514 aa)
	cwc15	CWC15 spliceosome associated protein homolog. (239 aa)
	LOC113167366	Zgc:153119. (310 aa)
	LOC113167366-2	UPF0692 protein C19orf54 homolog. (310 aa)
	LOC113148206	Synaptotagmin binding, cytoplasmic RNA interacting protein, like. (544 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
	gpatch1	G patch domain containing 1. (985 aa)
	mtrex	Mtr4 exosome RNA helicase. (1036 aa)
	prpf4b	Pre-mRNA processing factor 4Bb. (1017 aa)
	ENSATEP00000029779	Small nuclear ribonucleoprotein Sm D3. (140 aa)
	ENSATEP00000030753	Splicing factor 3a, subunit 1. (840 aa)
	xab2	XPA binding protein 2. (849 aa)
	ess2	Ess-2 splicing factor homolog. (474 aa)
	snrnp200	Small nuclear ribonucleoprotein 200 (U5). (2136 aa)
	LOC113149797	Synaptotagmin binding, cytoplasmic RNA interacting protein. (632 aa)
	ENSATEP00000032894	Small nuclear ribonucleoprotein polypeptide F. (93 aa)
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	eftud2	Elongation factor Tu GTP binding domain containing 2. (971 aa)
	ENSATEP00000001358	Small nuclear ribonucleoprotein Sm D2. (120 aa)
	ENSATEP00000001571	Crooked neck pre-mRNA splicing factor 1. (761 aa)
	wdr83	WD repeat domain containing 83. (317 aa)
	sf3b1	Splicing factor 3b, subunit 1. (1314 aa)
	snw1	SNW domain containing 1. (534 aa)
	rbmx	RNA binding motif protein X-linked. (393 aa)
	ddx23	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (806 aa)
	sf3b6	Splicing factor 3b, subunit 6. (125 aa)
	snrnp40	Small nuclear ribonucleoprotein 40 (U5). (347 aa)

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX41	ENSATEP00000004915	ENSATEP00000004763	ENSATEP00000004915	DEAD-box helicase 41.	PPIase cyclophilin-type domain-containing protein.	0.677
DDX41	ENSATEP00000010592	ENSATEP00000004763	ENSATEP00000010592	DEAD-box helicase 41.	Peptidylprolyl isomerase (cyclophilin)-like 2.	0.615
DDX41	ENSATEP00000013179	ENSATEP00000004763	ENSATEP00000013179	DEAD-box helicase 41.	DEAH (Asp-Glu-Ala-His) box polypeptide 34.	0.771
DDX41	ENSATEP00000013690	ENSATEP00000004763	ENSATEP00000013690	DEAD-box helicase 41.	Pinin, desmosome associated protein.	0.429
DDX41	ENSATEP00000016279	ENSATEP00000004763	ENSATEP00000016279	DEAD-box helicase 41.	Cell division cycle 40 homolog (S. cerevisiae).	0.735
DDX41	WDR25	ENSATEP00000004763	ENSATEP00000017972	DEAD-box helicase 41.	WD repeat domain 25.	0.703
DDX41	cwc22	ENSATEP00000004763	ENSATEP00000007332	DEAD-box helicase 41.	CWC22 spliceosome associated protein homolog.	0.744
DDX41	cwc27	ENSATEP00000004763	ENSATEP00000010738	DEAD-box helicase 41.	CWC27 spliceosome associated cyclophilin.	0.463
DDX41	ddx23	ENSATEP00000004763	ENSATEP00000024232	DEAD-box helicase 41.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.	0.607
DDX41	dhx35	ENSATEP00000004763	ENSATEP00000007626	DEAD-box helicase 41.	DEAH-box helicase 35.	0.764
DDX41	dhx38	ENSATEP00000004763	ENSATEP00000006778	DEAD-box helicase 41.	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	0.779
DDX41	dhx8	ENSATEP00000004763	ENSATEP00000011046	DEAD-box helicase 41.	DEAH (Asp-Glu-Ala-His) box polypeptide 8.	0.771
DDX41	gpatch1	ENSATEP00000004763	ENSATEP00000020792	DEAD-box helicase 41.	G patch domain containing 1.	0.670
DDX41	mtrex	ENSATEP00000004763	ENSATEP00000021870	DEAD-box helicase 41.	Mtr4 exosome RNA helicase.	0.748
DDX41	ppie	ENSATEP00000004763	ENSATEP00000010485	DEAD-box helicase 41.	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	0.575
DDX41	ppil1	ENSATEP00000004763	ENSATEP00000015818	DEAD-box helicase 41.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.701
DDX41	ppwd1	ENSATEP00000004763	ENSATEP00000010839	DEAD-box helicase 41.	Peptidylprolyl isomerase domain and WD repeat containing 1.	0.875
DDX41	srrm1	ENSATEP00000004763	ENSATEP00000010911	DEAD-box helicase 41.	Serine/arginine repetitive matrix 1.	0.735
ENSATEP00000001358	ENSATEP00000001571	ENSATEP00000001358	ENSATEP00000001571	Small nuclear ribonucleoprotein Sm D2.	Crooked neck pre-mRNA splicing factor 1.	0.991
ENSATEP00000001358	ENSATEP00000004915	ENSATEP00000001358	ENSATEP00000004915	Small nuclear ribonucleoprotein Sm D2.	PPIase cyclophilin-type domain-containing protein.	0.715