STRINGSTRING
lig4 lig4 polm polm lrmda lrmda ENSATEP00000005858 ENSATEP00000005858 LOC113158580 LOC113158580 xrcc6 xrcc6 rad50 rad50 dntt dntt nhej1 nhej1 ENSATEP00000015908 ENSATEP00000015908 mre11 mre11 fen1 fen1 LOC113172516 LOC113172516 xrcc5 xrcc5 poll poll ENKD1 ENKD1 ENSATEP00000031534 ENSATEP00000031534 dclre1c dclre1c
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lig4DNA ligase. (910 aa)
polmDNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (521 aa)
lrmdaLeucine rich melanocyte differentiation associated. (233 aa)
ENSATEP00000005858Uncharacterized protein. (169 aa)
LOC113158580X-ray repair complementing defective repair in Chinese hamster cells 4. (343 aa)
xrcc6X-ray repair complementing defective repair in Chinese hamster cells 6. (610 aa)
rad50RAD50 homolog, double strand break repair protein. (1312 aa)
dnttDNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (513 aa)
nhej1Nonhomologous end-joining factor 1. (322 aa)
ENSATEP00000015908General transcription factor IIIC, polypeptide 3. (904 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (700 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (382 aa)
LOC113172516Zgc:110269. (348 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (727 aa)
pollPolymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family. (567 aa)
ENKD1Enkurin domain containing 1. (302 aa)
ENSATEP00000031534Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (3993 aa)
dclre1cDNA cross-link repair 1C, PSO2 homolog (S. cerevisiae). (648 aa)
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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