STRINGSTRING
Daes_2375 Daes_2375 Daes_0519 Daes_0519 Daes_1086 Daes_1086 Daes_1087 Daes_1087 Daes_1089 Daes_1089 Daes_1288 Daes_1288 Daes_3337 Daes_3337 nuoB nuoB Daes_1290 Daes_1290 nuoD nuoD nuoH nuoH Daes_1293 Daes_1293 Daes_1294 Daes_1294 nuoK nuoK Daes_1296 Daes_1296 Daes_1298 Daes_1298 Daes_1299 Daes_1299 nuoN nuoN azoR azoR Daes_2931 Daes_2931 Daes_1697 Daes_1697 Daes_2371 Daes_2371 Daes_2372 Daes_2372 Daes_2373 Daes_2373
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Daes_2375PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: dsa:Desal_3233 NADH/ubiquinone/plastoquinone (complex I). (631 aa)
Daes_0519PFAM: NADPH-dependent FMN reductase; KEGG: dak:DaAHT2_1314 NADPH-dependent FMN reductase. (98 aa)
Daes_1086PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dat:HRM2_35360 MnhD2. (484 aa)
Daes_1087PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: dat:HRM2_35350 MnhA2. (487 aa)
Daes_1089PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dal:Dalk_4926 putative monovalent cation/H+ antiporter subunit D. (587 aa)
Daes_1288NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. (125 aa)
Daes_3337KEGG: dsa:Desal_3826 4Fe-4S ferredoxin iron-sulfur binding domain protein. (79 aa)
nuoBNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (181 aa)
Daes_1290PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dvm:DvMF_1595 NADH dehydrogenase (ubiquinone) 30 kDa subunit. (175 aa)
nuoDNADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (390 aa)
nuoHNADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (324 aa)
Daes_1293KEGG: dsa:Desal_1494 4Fe-4S ferredoxin iron-sulfur binding domain protein. (195 aa)
Daes_1294NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (169 aa)
nuoKNADH-ubiquinone oxidoreductase chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
Daes_1296PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvm:DvMF_1601 putative monovalent cation/H+ antiporter subunit D. (516 aa)
Daes_1298PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvm:DvMF_1603 putative monovalent cation/H+ antiporter subunit D. (597 aa)
Daes_1299KEGG: dsa:Desal_1500 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (510 aa)
nuoNNADH/Ubiquinone/plastoquinone (complex I); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (475 aa)
azoRNAD(P)H dehydrogenase (quinone); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. (204 aa)
Daes_2931PFAM: NADPH-dependent FMN reductase; KEGG: sat:SYN_02131 iron-sulfur flavoprotein. (220 aa)
Daes_1697PFAM: NAD(P)H dehydrogenase (quinone); KEGG: gur:Gura_0096 NAD(P)H dehydrogenase (quinone). (199 aa)
Daes_2371PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; nickel-dependent hydrogenase large subunit; KEGG: dsa:Desal_3237 NADH-ubiquinone oxidoreductase chain 49kDa. (359 aa)
Daes_2372KEGG: dsa:Desal_3236 hypothetical protein. (122 aa)
Daes_2373KEGG: dsa:Desal_3235 NADH dehydrogenase (quinone); PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Belongs to the complex I 20 kDa subunit family. (147 aa)
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
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