STRINGSTRING
Daes_0700 Daes_0700 Daes_0715 Daes_0715 Daes_0716 Daes_0716 purF purF Daes_1527 Daes_1527 Daes_1649 Daes_1649 Daes_1955 Daes_1955 Daes_2524 Daes_2524 Daes_3309 Daes_3309
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daes_0700PFAM: asparagine synthase; glutamine amidotransferase class-II; manually curated; KEGG: mag:amb0119 asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing). (631 aa)
Daes_0715TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: nde:NIDE2699 asparagine synthase; PFAM: asparagine synthase. (630 aa)
Daes_0716Manually curated; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: nde:NIDE2699 asparagine synthase; PFAM: asparagine synthase; glutamine amidotransferase class-II. (626 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (471 aa)
Daes_1527PFAM: glutamine amidotransferase class-II; KEGG: dde:Dde_1815 glutamate synthase (NADPH) GltB1 subunit. (365 aa)
Daes_1649PFAM: glutamine amidotransferase class-II; KEGG: dde:Dde_1864 glucosamine 6-phosphate synthetase-like. (265 aa)
Daes_1955PFAM: glutamine amidotransferase class-II; KEGG: dsa:Desal_3280 glutamate synthase (NADPH). (378 aa)
Daes_2524Glutamine--fructose-6-phosphate transaminase (isomerizing); KEGG: rce:RC1_3347 glucosamine--fructose-6-phosphate aminotransferase [isomerizing], putative; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II. (941 aa)
Daes_3309KEGG: dsa:Desal_3603 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase. (654 aa)
Your Current Organism:
Pseudodesulfovibrio aespoeensis
NCBI taxonomy Id: 643562
Other names: Desulfovibrio aespoeensis Aspo-2, Desulfovibrio aespoeensis DSM 10631, P. aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis Aspo-2, Pseudodesulfovibrio aespoeensis DSM 10631
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