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tpiA tpiA fabZ fabZ Slip_1140 Slip_1140 Slip_0834 Slip_0834 Slip_0762 Slip_0762 Slip_0646 Slip_0646 Slip_0564 Slip_0564 glgA glgA Slip_0514 Slip_0514 Slip_0175 Slip_0175 Slip_0172 Slip_0172 Slip_0167 Slip_0167 Slip_2308 Slip_2308 Slip_1951 Slip_1951 Slip_0030 Slip_0030 Slip_0031 Slip_0031 glmU glmU Slip_0153 Slip_0153 Slip_0161 Slip_0161 Slip_0162 Slip_0162 Slip_0163 Slip_0163 Slip_0165 Slip_0165 Slip_0166 Slip_0166
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (257 aa)
fabZBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (144 aa)
Slip_1140KEGG: swo:Swol_1380 hypothetical protein; SPTR: Q0AX67 Putative uncharacterized protein. (624 aa)
Slip_0834COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: swo:Swol_0965 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Q0AYC4 1,2-diacylglycerol 3-glucosyltransferase; PFAM: Glycosyl transferases group 1. (402 aa)
Slip_0762COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rmr:Rmar_2613 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: D0MFZ7 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; Mannose-6-phosphate isomerase. (453 aa)
Slip_0646Domain of unknown function DUF1957; COGs: COG1543 conserved hypothetical protein; InterPro IPR011330:IPR004300:IPR015293; KEGG: pth:PTH_2228 hypothetical protein; PFAM: Domain of unknown function DUF1957; glycoside hydrolase family 57; SPTR: A5D025 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57. (530 aa)
Slip_0564Metallophosphoesterase; COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: amt:Amet_1695 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: A6TNV3 Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase. (384 aa)
glgAGlycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (484 aa)
Slip_0514COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dae:Dtox_0787 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: C8W232 Glycosyl transferase group 1; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1. (421 aa)
Slip_0175DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015424:IPR015421:IPR015422; KEGG: gwc:GWCH70_3253 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: C5D944 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family. (380 aa)
Slip_0172Undecaprenyl-phosphate galactose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: dtu:Dtur_0586 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: B8DZE1 Undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase. (223 aa)
Slip_0167COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cpy:Cphy_3501 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: B0N0E8 Putative uncharacterized protein; PFAM: Glycosyl transferases group 1. (412 aa)
Slip_2308Fructose-1,6-bisphosphatase, class II; COGs: COG1494 Fructose-1 6-bisphosphatase/sedoheptulose 1 7-bisphosphatase and related protein; InterPro IPR004464; KEGG: swo:Swol_2409 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein; PRIAM: Fructose-bisphosphatase; SPTR: Q0AUA6 Putative uncharacterized protein; TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II. (328 aa)
Slip_1951COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: swo:Swol_0184 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: Q0B0G8 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (371 aa)
Slip_0030Glutamine--scyllo-inositol transaminase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015424:IPR015421:IPR015422; KEGG: dae:Dtox_1135 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: C8W4F3 Glutamine--scyllo-inositol transaminase; manually curated; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family. (362 aa)
Slip_0031Transferase hexapeptide repeat containing protein; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR011004:IPR001451; KEGG: tpe:Tpen_0895 hexapaptide repeat-containing transferase; PFAM: transferase hexapeptide repeat containing protein; SPTR: B5IQV0 Bacterial transferase hexapeptide repeat protein; PFAM: Bacterial transferase hexapeptide (three repeats). (195 aa)
glmUUDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (462 aa)
Slip_0153Membrane bound O-acyl transferase MBOAT family protein; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: azc:AZC_2811 membrane bound O-acyl transferase; PFAM: membrane bound O-acyl transferase MBOAT family protein; SPTR: C5ELZ0 Alginate O-acetylation protein algI; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family. (410 aa)
Slip_0161Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR016040:IPR003869; KEGG: swo:Swol_0128 hypothetical protein; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Q0B0M1 Putative uncharacterized protein; manually curated; PFAM: Polysaccharide biosynthesis protein. (611 aa)
Slip_0162COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfr:BF1109 putative glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Q9RGI9 Putative glycosyltransferase; PFAM: Glycosyl transferases group 1. (403 aa)
Slip_0163Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR016040:IPR003869:IPR013692; KEGG: drm:Dred_3033 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; Polysaccharide biosynthesis domain protein; SPTR: A4J8Y3 Polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein; Polysaccharide biosynthesis protein C-terminal. (357 aa)
Slip_0165COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: sha:SH0394 capsular polysaccharide synthesis enzyme CapG; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: C6JQH6 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase. (376 aa)
Slip_0166COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cpi:Cpin_1085 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Q7P738 Glycosyltransferase; PFAM: Glycosyl transferase family 2. (342 aa)
Your Current Organism:
Syntrophothermus lipocalidus
NCBI taxonomy Id: 643648
Other names: S. lipocalidus DSM 12680, Syntrophothermus lipocalidus DSM 12680, Syntrophothermus lipocalidus TGB-C1, Syntrophothermus lipocalidus str. DSM 12680, Syntrophothermus lipocalidus strain DSM 12680
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