STRINGSTRING
EEX08577.1 EEX08577.1 EEX08579.1 EEX08579.1 EEX08580.1 EEX08580.1 EEX08581.1 EEX08581.1 EEX08583.1 EEX08583.1 EEX08584.1 EEX08584.1 EEX08585.1 EEX08585.1 EEX08586.1 EEX08586.1 EEX08587.1 EEX08587.1 EEX08588.1 EEX08588.1 EEX08590.1 EEX08590.1 EEX08591.1 EEX08591.1 EEX09686.1 EEX09686.1 EEX09687.1 EEX09687.1 EEX09688.1 EEX09688.1 EEX09689.1 EEX09689.1 EEX09693.1 EEX09693.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EEX08577.1Bkd operon transcriptional regulator; Identified by match to protein family HMM PF01037. (153 aa)
EEX08579.1Identified by match to protein family HMM PF00582. (151 aa)
EEX08580.1Dsba oxidoreductase; Identified by match to protein family HMM PF01323. (197 aa)
EEX08581.1NifU domain protein; Identified by match to protein family HMM PF01106; match to protein family HMM PF08712. (187 aa)
EEX08583.1Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583. (137 aa)
EEX08584.1Sugar ABC transporter, periplasmic sugar-binding protein; Identified by match to protein family HMM PF02608. (333 aa)
EEX08585.1Sugar ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (509 aa)
EEX08586.1Sugar ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (364 aa)
EEX08587.1Sugar ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
EEX08588.1Identified by match to protein family HMM PF01925. (307 aa)
EEX08590.1Putative membrane protein; Identified by match to protein family HMM PF01925. (306 aa)
EEX08591.1Conserved hypothetical protein; Identified by match to protein family HMM PF09608. (254 aa)
EEX09686.1Bmp family protein; Identified by match to protein family HMM PF02608. (357 aa)
EEX09687.1Sugar ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (306 aa)
EEX09688.1Sugar ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (360 aa)
EEX09689.1Sugar ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (505 aa)
EEX09693.1Conserved hypothetical protein. (121 aa)
Your Current Organism:
Ruegeria lacuscaerulensis
NCBI taxonomy Id: 644107
Other names: R. lacuscaerulensis ITI-1157, Ruegeria lacuscaerulensis DSM 11314, Ruegeria lacuscaerulensis ITI-1157, Silicibacter lacuscaerulensis KCTC 2953
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