STRINGSTRING
C4QWH0_KOMPG C4QWH0_KOMPG C4R257_KOMPG C4R257_KOMPG C4R2C0_KOMPG C4R2C0_KOMPG C4R4T7_KOMPG C4R4T7_KOMPG C4R540_KOMPG C4R540_KOMPG C4R5U1_KOMPG C4R5U1_KOMPG C4R669_KOMPG C4R669_KOMPG C4R6B6_KOMPG C4R6B6_KOMPG C4R6E7_KOMPG C4R6E7_KOMPG C4R714_KOMPG C4R714_KOMPG C4R7M3_KOMPG C4R7M3_KOMPG SEC13 SEC13
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
C4QWH0_KOMPGNuclear pore protein that is part of the evolutionarily conserved Nup84p complex; Belongs to the WD repeat SEC13 family. (320 aa)
C4R257_KOMPGNucleoporin involved in nucleocytoplasmic transport. (603 aa)
C4R2C0_KOMPGEssential structural subunit of the nuclear pore complex (NPC). (1646 aa)
C4R4T7_KOMPGEssential component of the nuclear pore complex. (966 aa)
C4R540_KOMPGNuclear pore protein. (920 aa)
C4R5U1_KOMPGNUP214 domain-containing protein. (1221 aa)
C4R669_KOMPGSubunit of the Nup84p subcomplex of the nuclear pore complex (NPC). (1149 aa)
C4R6B6_KOMPGNuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (767 aa)
C4R6E7_KOMPGNuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (783 aa)
C4R714_KOMPGAbundant subunit of the nuclear pore complex (NPC). (1423 aa)
C4R7M3_KOMPGNucleoporin, essential subunit of the nuclear pore complex (NPC). (537 aa)
SEC13Protein transport protein SEC13; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport facto [...] (289 aa)
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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