STRINGSTRING
C4QYY1_KOMPG C4QYY1_KOMPG C4QV20_KOMPG C4QV20_KOMPG C4QV46_KOMPG C4QV46_KOMPG C4QV54_KOMPG C4QV54_KOMPG C4QV73_KOMPG C4QV73_KOMPG C4QV91_KOMPG C4QV91_KOMPG C4QV98_KOMPG C4QV98_KOMPG LSM4 LSM4 C4QVE5_KOMPG C4QVE5_KOMPG C4QVH2_KOMPG C4QVH2_KOMPG C4QVH3_KOMPG C4QVH3_KOMPG C4QVJ0_KOMPG C4QVJ0_KOMPG C4QVL1_KOMPG C4QVL1_KOMPG C4QVN0_KOMPG C4QVN0_KOMPG C4QVN7_KOMPG C4QVN7_KOMPG C4QVP7_KOMPG C4QVP7_KOMPG C4QVQ9_KOMPG C4QVQ9_KOMPG C4QVR2_KOMPG C4QVR2_KOMPG C4QVR7_KOMPG C4QVR7_KOMPG LSM3 LSM3 C4QVU5_KOMPG C4QVU5_KOMPG C4QVU9_KOMPG C4QVU9_KOMPG C4QVV2_KOMPG C4QVV2_KOMPG C4QVZ5_KOMPG C4QVZ5_KOMPG C4QW00_KOMPG C4QW00_KOMPG C4QW19_KOMPG C4QW19_KOMPG PAN2 PAN2 C4QW95_KOMPG C4QW95_KOMPG C4QWA9_KOMPG C4QWA9_KOMPG C4QWD9_KOMPG C4QWD9_KOMPG C4QWF1_KOMPG C4QWF1_KOMPG C4QWG5_KOMPG C4QWG5_KOMPG C4QWH3_KOMPG C4QWH3_KOMPG C4QWH4_KOMPG C4QWH4_KOMPG C4QWJ6_KOMPG C4QWJ6_KOMPG C4QWK2_KOMPG C4QWK2_KOMPG C4QWK3_KOMPG C4QWK3_KOMPG C4QWK9_KOMPG C4QWK9_KOMPG C4QWS0_KOMPG C4QWS0_KOMPG C4QWW7_KOMPG C4QWW7_KOMPG C4QWY0_KOMPG C4QWY0_KOMPG C4QWY7_KOMPG C4QWY7_KOMPG C4QX20_KOMPG C4QX20_KOMPG C4QX56_KOMPG C4QX56_KOMPG C4QX67_KOMPG C4QX67_KOMPG C4QXA9_KOMPG C4QXA9_KOMPG C4QXB6_KOMPG C4QXB6_KOMPG C4QXD2_KOMPG C4QXD2_KOMPG C4QXE8_KOMPG C4QXE8_KOMPG C4QXF7_KOMPG C4QXF7_KOMPG C4QXG4_KOMPG C4QXG4_KOMPG C4QXH4_KOMPG C4QXH4_KOMPG C4QXH8_KOMPG C4QXH8_KOMPG C4QXK9_KOMPG C4QXK9_KOMPG C4QXL6_KOMPG C4QXL6_KOMPG C4QXN7_KOMPG C4QXN7_KOMPG C4QXP6_KOMPG C4QXP6_KOMPG C4QXR9_KOMPG C4QXR9_KOMPG C4QXS5_KOMPG C4QXS5_KOMPG C4QXU0_KOMPG C4QXU0_KOMPG C4QXY9_KOMPG C4QXY9_KOMPG C4QY63_KOMPG C4QY63_KOMPG C4QY74_KOMPG C4QY74_KOMPG C4QY79_KOMPG C4QY79_KOMPG C4QY94_KOMPG C4QY94_KOMPG C4QY99_KOMPG C4QY99_KOMPG C4QYD6_KOMPG C4QYD6_KOMPG C4QYE0_KOMPG C4QYE0_KOMPG C4QYN1_KOMPG C4QYN1_KOMPG C4QYP5_KOMPG C4QYP5_KOMPG C4QYP9_KOMPG C4QYP9_KOMPG C4QYQ1_KOMPG C4QYQ1_KOMPG C4QYQ5_KOMPG C4QYQ5_KOMPG C4QYX4_KOMPG C4QYX4_KOMPG C4QYX7_KOMPG C4QYX7_KOMPG C4QYX9_KOMPG C4QYX9_KOMPG C4QYZ9_KOMPG C4QYZ9_KOMPG C4QZ18_KOMPG C4QZ18_KOMPG C4QZ33_KOMPG C4QZ33_KOMPG C4QZ61_KOMPG C4QZ61_KOMPG C4QZC0_KOMPG C4QZC0_KOMPG C4QZE6_KOMPG C4QZE6_KOMPG C4QZH1_KOMPG C4QZH1_KOMPG C4QZJ4_KOMPG C4QZJ4_KOMPG C4QZM5_KOMPG C4QZM5_KOMPG C4QZS1_KOMPG C4QZS1_KOMPG C4QZT9_KOMPG C4QZT9_KOMPG C4QZW3_KOMPG C4QZW3_KOMPG C4QZW9_KOMPG C4QZW9_KOMPG C4QZX1_KOMPG C4QZX1_KOMPG C4R000_KOMPG C4R000_KOMPG C4R002_KOMPG C4R002_KOMPG C4R018_KOMPG C4R018_KOMPG C4R019_KOMPG C4R019_KOMPG C4R085_KOMPG C4R085_KOMPG C4R0E6_KOMPG C4R0E6_KOMPG C4R0G1_KOMPG C4R0G1_KOMPG C4R0I5_KOMPG C4R0I5_KOMPG C4R0L1_KOMPG C4R0L1_KOMPG C4R0L6_KOMPG C4R0L6_KOMPG C4R0Q3_KOMPG C4R0Q3_KOMPG C4R0Q8_KOMPG C4R0Q8_KOMPG C4R0S2_KOMPG C4R0S2_KOMPG C4R0V1_KOMPG C4R0V1_KOMPG C4R0X1_KOMPG C4R0X1_KOMPG C4R0Y8_KOMPG C4R0Y8_KOMPG C4R0Z4_KOMPG C4R0Z4_KOMPG PAN3 PAN3 C4R114_KOMPG C4R114_KOMPG C4R155_KOMPG C4R155_KOMPG C4R1A4_KOMPG C4R1A4_KOMPG C4R1B7_KOMPG C4R1B7_KOMPG C4R1D3_KOMPG C4R1D3_KOMPG C4R1E3_KOMPG C4R1E3_KOMPG C4R1E6_KOMPG C4R1E6_KOMPG C4R1I3_KOMPG C4R1I3_KOMPG C4R1K6_KOMPG C4R1K6_KOMPG C4R1L6_KOMPG C4R1L6_KOMPG C4R1M5_KOMPG C4R1M5_KOMPG C4R1U1_KOMPG C4R1U1_KOMPG C4R1U9_KOMPG C4R1U9_KOMPG C4R1V6_KOMPG C4R1V6_KOMPG C4R1W1_KOMPG C4R1W1_KOMPG C4R203_KOMPG C4R203_KOMPG C4R216_KOMPG C4R216_KOMPG NAT10 NAT10 C4R242_KOMPG C4R242_KOMPG C4R292_KOMPG C4R292_KOMPG C4R2F3_KOMPG C4R2F3_KOMPG C4R2K8_KOMPG C4R2K8_KOMPG C4R2K9_KOMPG C4R2K9_KOMPG C4R2P6_KOMPG C4R2P6_KOMPG C4R2Q3_KOMPG C4R2Q3_KOMPG C4R2Q7_KOMPG C4R2Q7_KOMPG C4R2R7_KOMPG C4R2R7_KOMPG C4R2R8_KOMPG C4R2R8_KOMPG C4R2U9_KOMPG C4R2U9_KOMPG C4R2V3_KOMPG C4R2V3_KOMPG C4R2V7_KOMPG C4R2V7_KOMPG C4R319_KOMPG C4R319_KOMPG C4R335_KOMPG C4R335_KOMPG C4R370_KOMPG C4R370_KOMPG C4R3D6_KOMPG C4R3D6_KOMPG C4R3F3_KOMPG C4R3F3_KOMPG C4R3Q0_KOMPG C4R3Q0_KOMPG C4R405_KOMPG C4R405_KOMPG C4R407_KOMPG C4R407_KOMPG C4R419_KOMPG C4R419_KOMPG C4R426_KOMPG C4R426_KOMPG C4R428_KOMPG C4R428_KOMPG C4R476_KOMPG C4R476_KOMPG C4R477_KOMPG C4R477_KOMPG C4R485_KOMPG C4R485_KOMPG C4R4E4_KOMPG C4R4E4_KOMPG C4R4G0_KOMPG C4R4G0_KOMPG C4R4H9_KOMPG C4R4H9_KOMPG C4R4I3_KOMPG C4R4I3_KOMPG C4R4J6_KOMPG C4R4J6_KOMPG C4R4J7_KOMPG C4R4J7_KOMPG LSM1 LSM1 C4R4M4_KOMPG C4R4M4_KOMPG C4R4Q8_KOMPG C4R4Q8_KOMPG C4R4X5_KOMPG C4R4X5_KOMPG C4R4Z2_KOMPG C4R4Z2_KOMPG C4R4Z3_KOMPG C4R4Z3_KOMPG C4R514_KOMPG C4R514_KOMPG C4R520_KOMPG C4R520_KOMPG C4R554_KOMPG C4R554_KOMPG C4R555_KOMPG C4R555_KOMPG C4R557_KOMPG C4R557_KOMPG C4R568_KOMPG C4R568_KOMPG C4R574_KOMPG C4R574_KOMPG C4R576_KOMPG C4R576_KOMPG CLP1 CLP1 C4R5G5_KOMPG C4R5G5_KOMPG C4R5G7_KOMPG C4R5G7_KOMPG C4R5G9_KOMPG C4R5G9_KOMPG C4R5L2_KOMPG C4R5L2_KOMPG CCM1 CCM1 C4R5R1_KOMPG C4R5R1_KOMPG C4R5Z8_KOMPG C4R5Z8_KOMPG C4R600_KOMPG C4R600_KOMPG C4R601_KOMPG C4R601_KOMPG C4R607_KOMPG C4R607_KOMPG C4R9F0_KOMPG C4R9F0_KOMPG C4R9C7_KOMPG C4R9C7_KOMPG C4R9B1_KOMPG C4R9B1_KOMPG C4R9A1_KOMPG C4R9A1_KOMPG C4R989_KOMPG C4R989_KOMPG C4R977_KOMPG C4R977_KOMPG C4R958_KOMPG C4R958_KOMPG C4R900_KOMPG C4R900_KOMPG C4R8X3_KOMPG C4R8X3_KOMPG C4R8X2_KOMPG C4R8X2_KOMPG C4R8V3_KOMPG C4R8V3_KOMPG C4R8S4_KOMPG C4R8S4_KOMPG C4R8Q8_KOMPG C4R8Q8_KOMPG C4R8P3_KOMPG C4R8P3_KOMPG C4R8K4_KOMPG C4R8K4_KOMPG C4R8A2_KOMPG C4R8A2_KOMPG C4R899_KOMPG C4R899_KOMPG C4R873_KOMPG C4R873_KOMPG C4R838_KOMPG C4R838_KOMPG C4R832_KOMPG C4R832_KOMPG C4R821_KOMPG C4R821_KOMPG C4R805_KOMPG C4R805_KOMPG C4R7Y6_KOMPG C4R7Y6_KOMPG C4R7X6_KOMPG C4R7X6_KOMPG C4R7V7_KOMPG C4R7V7_KOMPG C4R7N7_KOMPG C4R7N7_KOMPG C4R7H3_KOMPG C4R7H3_KOMPG C4R7H2_KOMPG C4R7H2_KOMPG C4R7G5_KOMPG C4R7G5_KOMPG C4R7E0_KOMPG C4R7E0_KOMPG C4R7A6_KOMPG C4R7A6_KOMPG C4R797_KOMPG C4R797_KOMPG C4R786_KOMPG C4R786_KOMPG C4R784_KOMPG C4R784_KOMPG C4R779_KOMPG C4R779_KOMPG C4R777_KOMPG C4R777_KOMPG C4R751_KOMPG C4R751_KOMPG C4R744_KOMPG C4R744_KOMPG C4R729_KOMPG C4R729_KOMPG C4R707_KOMPG C4R707_KOMPG C4R6X9_KOMPG C4R6X9_KOMPG C4R6X8_KOMPG C4R6X8_KOMPG C4R6U7_KOMPG C4R6U7_KOMPG C4R6T4_KOMPG C4R6T4_KOMPG C4R6M1_KOMPG C4R6M1_KOMPG C4R6I4_KOMPG C4R6I4_KOMPG C4R6H0_KOMPG C4R6H0_KOMPG C4R6G1_KOMPG C4R6G1_KOMPG C4R6F6_KOMPG C4R6F6_KOMPG C4R6F5_KOMPG C4R6F5_KOMPG C4R6E9_KOMPG C4R6E9_KOMPG C4R6E3_KOMPG C4R6E3_KOMPG C4R6B9_KOMPG C4R6B9_KOMPG C4R6B8_KOMPG C4R6B8_KOMPG C4R6B2_KOMPG C4R6B2_KOMPG C4R668_KOMPG C4R668_KOMPG C4R650_KOMPG C4R650_KOMPG C4R631_KOMPG C4R631_KOMPG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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C4QYY1_KOMPGSubunit of the RNA polymerase II-associated Paf1 complex. (476 aa)
C4QV20_KOMPGUncharacterized protein. (356 aa)
C4QV46_KOMPGRRM domain-containing protein. (627 aa)
C4QV54_KOMPGSplicing factor that reanneals U4 and U6 snRNPs during spliceosome recycling. (865 aa)
C4QV73_KOMPGProtein chaperone involved in regulation of the HSP90 and HSP70 functions. (274 aa)
C4QV91_KOMPGUncharacterized protein. (657 aa)
C4QV98_KOMPGSNRNP27 domain-containing protein. (129 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (122 aa)
C4QVE5_KOMPGSubunit of the Dcp1p-Dcp2p decapping enzyme complex. (169 aa)
C4QVH2_KOMPGEssential splicing factor. (640 aa)
C4QVH3_KOMPGRNA-binding subunit of the mRNA cleavage and polyadenylation factor. (1388 aa)
C4QVJ0_KOMPGUncharacterized protein. (311 aa)
C4QVL1_KOMPGNuclear pore-associated protein, forms a complex with Thp1p. (1055 aa)
C4QVN0_KOMPGU1-type domain-containing protein. (218 aa)
C4QVN7_KOMPGEssential protein associated with the U1 snRNP complex. (248 aa)
C4QVP7_KOMPGSm domain-containing protein. (79 aa)
C4QVQ9_KOMPGUncharacterized protein. (205 aa)
C4QVR2_KOMPGNon-essential tRNA:pseudouridine synthase. (438 aa)
C4QVR7_KOMPGUncharacterized protein. (583 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (84 aa)
C4QVU5_KOMPGPutative endoribonuclease. (784 aa)
C4QVU9_KOMPGComponent of the TREX complex required for nuclear mRNA export. (436 aa)
C4QVV2_KOMPGUncharacterized protein. (240 aa)
C4QVZ5_KOMPGRRM domain-containing protein. (114 aa)
C4QW00_KOMPGRRM domain-containing protein. (192 aa)
C4QW19_KOMPGRNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm. (329 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1118 aa)
C4QW95_KOMPGNuclear cap-binding protein subunit 2. (281 aa)
C4QWA9_KOMPGPeripheral mitochondrial inner membrane protein, located on the matrix face of the membrane. (592 aa)
C4QWD9_KOMPGComponent of the spliceosome complex involved in pre-mRNA splicing. (809 aa)
C4QWF1_KOMPGSubunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4. (326 aa)
C4QWG5_KOMPGUncharacterized protein. (347 aa)
C4QWH3_KOMPGNuclear pore-associated protein, forms a complex with Sac3p. (465 aa)
C4QWH4_KOMPGSmg4_UPF3 domain-containing protein. (321 aa)
C4QWJ6_KOMPGEssential RNA-binding component of cleavage and polyadenylation factor, contains five zinc fingers. (260 aa)
C4QWK2_KOMPGSubunit of the THO complex. (1636 aa)
C4QWK3_KOMPGUncharacterized protein. (89 aa)
C4QWK9_KOMPGSm domain-containing protein. (156 aa)
C4QWS0_KOMPGWD_REPEATS_REGION domain-containing protein. (320 aa)
C4QWW7_KOMPGRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (236 aa)
C4QWY0_KOMPGUncharacterized protein. (392 aa)
C4QWY7_KOMPGComponent of U4/U6.U5 snRNP involved in mRNA splicing via spliceosome. (197 aa)
C4QX20_KOMPGPre-mRNA splicing factor. (345 aa)
C4QX56_KOMPGPoly(A+) RNA-binding protein, involved in the export of mRNAs from the nucleus to the cytoplasm. (445 aa)
C4QX67_KOMPGCytoplasmic DExD/H-box helicase; Belongs to the DEAD box helicase family. (472 aa)
C4QXA9_KOMPGRNA-dependent ATPase RNA helicase (DEIH box). (2147 aa)
C4QXB6_KOMPGProtein NRD1. (596 aa)
C4QXD2_KOMPGUncharacterized protein. (355 aa)
C4QXE8_KOMPGExosome component. (260 aa)
C4QXF7_KOMPGUncharacterized protein. (470 aa)
C4QXG4_KOMPGExonuclease component of the nuclear exosome. (717 aa)
C4QXH4_KOMPGDEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase. (1005 aa)
C4QXH8_KOMPGEssential conserved subunit of CPF (Cleavage and polyadenylation factor). (386 aa)
C4QXK9_KOMPGCCR4-NOT transcription complex subunit 3. (620 aa)
C4QXL6_KOMPGProtein that interacts with exonuclease Rat1p and Rai1p. (375 aa)
C4QXN7_KOMPGUncharacterized protein. (259 aa)
C4QXP6_KOMPGU1 snRNP protein involved in splicing. (465 aa)
C4QXR9_KOMPGUncharacterized protein. (967 aa)
C4QXS5_KOMPGTRNA pseudouridine38-40 synthase. (509 aa)
C4QXU0_KOMPGSmall nuclear ribonucleoprotein Sm D2. (124 aa)
C4QXY9_KOMPGNuclear protein that binds to and stabilizes the exoribonuclease Rat1p. (381 aa)
C4QY63_KOMPGEssential protein. (571 aa)
C4QY74_KOMPGSubunit of cleavage factor I. (462 aa)
C4QY79_KOMPGDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (113 aa)
C4QY94_KOMPGUncharacterized protein. (155 aa)
C4QY99_KOMPGCwf21 domain-containing protein. (177 aa)
C4QYD6_KOMPGEssential protein, component of a complex containing Cef1p. (238 aa)
C4QYE0_KOMPGSplicing factor. (260 aa)
C4QYN1_KOMPGProtein involved in exosome mediated 3' to 5' mRNA degradation. (361 aa)
C4QYP5_KOMPGSubunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P. (821 aa)
C4QYP9_KOMPGProtein SQS1. (684 aa)
C4QYQ1_KOMPGTranscription/RNA-processing factor. (231 aa)
C4QYQ5_KOMPGSmall nuclear ribonucleoprotein-associated protein. (153 aa)
C4QYX4_KOMPGNuclear polyadenylated RNA-binding protein. (480 aa)
C4QYX7_KOMPGRNA helicase in the DEAH-box family. (753 aa)
C4QYX9_KOMPGGeneral negative regulator of transcription subunit 4. (650 aa)
C4QYZ9_KOMPGSmall nuclear ribonucleoprotein Sm D3. (100 aa)
C4QZ18_KOMPGPINc domain-containing protein. (1032 aa)
C4QZ33_KOMPGPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (551 aa)
C4QZ61_KOMPGSmall nuclear ribonucleoprotein G. (77 aa)
C4QZC0_KOMPGPolyadenylation factor subunit 2. (439 aa)
C4QZE6_KOMPGSmr domain-containing protein. (248 aa)
C4QZH1_KOMPGUncharacterized protein. (261 aa)
C4QZJ4_KOMPGTRNA pseudouridine55 synthase. (391 aa)
C4QZM5_KOMPGPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (626 aa)
C4QZS1_KOMPGSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
C4QZT9_KOMPGJ domain-containing protein. (201 aa)
C4QZW3_KOMPGCleavage and polyadenylation specificity factor subunit 2. (854 aa)
C4QZW9_KOMPGRibonuclease P protein component, mitochondrial. (697 aa)
C4QZX1_KOMPGUncharacterized protein. (239 aa)
C4R000_KOMPGUncharacterized protein. (231 aa)
C4R002_KOMPGmRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (475 aa)
C4R018_KOMPGCleavage stimulation factor subunit 3. (648 aa)
C4R019_KOMPGCytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM). (293 aa)
C4R085_KOMPGSubunit of both RNase MRP. (122 aa)
C4R0E6_KOMPGTranscription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (114 aa)
C4R0G1_KOMPGProbable mRNA N6-adenosine methyltransferase; Belongs to the MT-A70-like family. (439 aa)
C4R0I5_KOMPGSubunit of RNase MRP. (195 aa)
C4R0L1_KOMPGCytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM). (209 aa)
C4R0L6_KOMPGU2-snRNP associated splicing factor. (1037 aa)
C4R0Q3_KOMPGComponent of the U1 snRNP complex required for pre-mRNA splicing. (122 aa)
C4R0Q8_KOMPGSplicing factor 3B subunit 2. (429 aa)
C4R0S2_KOMPGCTD kinase subunit alpha. (645 aa)
C4R0V1_KOMPGComponent of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels. (172 aa)
C4R0X1_KOMPGMember of the Sir2 family of NAD(+)-dependent protein deacetylases. (461 aa)
C4R0Y8_KOMPGPWI domain-containing protein. (177 aa)
C4R0Z4_KOMPGProtein of the mitochondrial outer surface. (759 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (614 aa)
C4R114_KOMPGDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
C4R155_KOMPGPresumed helicase required for RNA polymerase II transcription termination and processing of RNAs. (2146 aa)
C4R1A4_KOMPGSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (320 aa)
C4R1B7_KOMPGUncharacterized protein. (1080 aa)
C4R1D3_KOMPGLarge subunit of the nuclear mRNA cap-binding protein complex. (898 aa)
C4R1E3_KOMPGG-patch domain-containing protein. (663 aa)
C4R1E6_KOMPGConstituent of Paf1 complex with RNA polymerase II, Paf1p, Hpr1p, Ctr9, Leo1, Rtf1 and Ccr4p. (365 aa)
C4R1I3_KOMPGPutative RNA helicase. (1233 aa)
C4R1K6_KOMPGProtein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (377 aa)
C4R1L6_KOMPGCID domain-containing protein. (274 aa)
C4R1M5_KOMPGUncharacterized protein. (402 aa)
C4R1U1_KOMPGU1 snRNP protein involved in splicing, contains multiple tetriatricopeptide repeats. (613 aa)
C4R1U9_KOMPGSuperkiller protein 3. (1402 aa)
C4R1V6_KOMPGCore Sm protein Sm F. (90 aa)
C4R1W1_KOMPGSplicing factor, component of the U4/U6-U5 snRNP complex. (424 aa)
C4R203_KOMPGTopoisomerase II-associated deadenylation-dependent mRNA-decapping factor. (833 aa)
C4R216_KOMPGRNase III domain-containing protein. (349 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1061 aa)
C4R242_KOMPGConserved zinc-finger domain protein involved in pre-mRNA splicing. (444 aa)
C4R292_KOMPGUncharacterized protein. (688 aa)
C4R2F3_KOMPGRING finger protein that interacts with the arginine methyltransferase Hmt1p. (280 aa)
C4R2K8_KOMPGProtein involved in pre-mRNA splicing, component of a complex containing Cef1p. (313 aa)
C4R2K9_KOMPGRNA helicase in the DEAD-box family, involved in RNA isomerization at the 5' splice site; Belongs to the DEAD box helicase family. (555 aa)
C4R2P6_KOMPGtRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (377 aa)
C4R2Q3_KOMPGPseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles. (482 aa)
C4R2Q7_KOMPGProtein involved in bud-site selection. (141 aa)
C4R2R7_KOMPGCleavage and polyadenylation factor I (CF I) component. (245 aa)
C4R2R8_KOMPGRRM domain-containing protein. (382 aa)
C4R2U9_KOMPGRNA polymerase II subunit B32. (186 aa)
C4R2V3_KOMPGGTPase component of U5 snRNP involved in mRNA splicing via spliceosome. (967 aa)
C4R2V7_KOMPGIntegral inner mitochondrial membrane protein. (807 aa)
C4R319_KOMPGSerine/threonine protein kinase, subunit of the transcription factor TFIIH; Belongs to the protein kinase superfamily. (319 aa)
C4R335_KOMPGRRM domain-containing protein. (295 aa)
C4R370_KOMPGProtein that forms a complex with Spt4p. (908 aa)
C4R3D6_KOMPGUncharacterized protein. (460 aa)
C4R3F3_KOMPGSm domain-containing protein. (86 aa)
C4R3Q0_KOMPGMFAP1 domain-containing protein. (259 aa)
C4R405_KOMPGPUM-HD domain-containing protein. (436 aa)
C4R407_KOMPGmRNA 3' end processing factor. (543 aa)
C4R419_KOMPGUncharacterized protein. (285 aa)
C4R426_KOMPGNon-essential hydrolase involved in mRNA decapping. (308 aa)
C4R428_KOMPGPINc domain-containing protein. (380 aa)
C4R476_KOMPGComponent of the commitment complex. (458 aa)
C4R477_KOMPGEssential splicesome assembly factor. (689 aa)
C4R485_KOMPGSubunit of cleavage polyadenylation factor (CPF). (314 aa)
C4R4E4_KOMPG3'-to-5' phosphorolytic exoribonuclease that is a subunit of the exosome. (246 aa)
C4R4G0_KOMPGTranslation termination factor eRF3. (703 aa)
C4R4H9_KOMPGUncharacterized protein. (252 aa)
C4R4I3_KOMPGUncharacterized protein. (758 aa)
C4R4J6_KOMPG5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1451 aa)
C4R4J7_KOMPGSubunit of the RES complex. (183 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (157 aa)
C4R4M4_KOMPGUncharacterized protein. (102 aa)
C4R4Q8_KOMPGRNA-dependent ATPase in the DEAH-box family. (889 aa)
C4R4X5_KOMPGSde2_N_Ubi domain-containing protein. (210 aa)
C4R4Z2_KOMPG3'-5' exoribonuclease involved in rRNA processing. (348 aa)
C4R4Z3_KOMPGZinc cluster protein involved in pre-mRNA splicing and cycloheximide resistance. (108 aa)
C4R514_KOMPGProtein involved in rRNA processing. (368 aa)
C4R520_KOMPGBeta (RNA 5'-triphosphatase) subunit of the mRNA capping enzyme. (423 aa)
C4R554_KOMPGSubunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF. (734 aa)
C4R555_KOMPGSubunit of the SF3a splicing factor complex, required for spliceosome assembly. (509 aa)
C4R557_KOMPGRNA helicase in the DEAD-box family, necessary for prespliceosome formation; Belongs to the DEAD box helicase family. (784 aa)
C4R568_KOMPGRegulator of nonsense transcripts 1. (941 aa)
C4R574_KOMPGRRM domain-containing protein. (211 aa)
C4R576_KOMPGSpliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (146 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (483 aa)
C4R5G5_KOMPGUncharacterized protein. (464 aa)
C4R5G7_KOMPGProtein involved in rRNA processing. (221 aa)
C4R5G9_KOMPGSplicing factor, component of the U4/U6-U5 snRNP complex. (447 aa)
C4R5L2_KOMPGUncharacterized protein. (506 aa)
CCM1Mitochondrial group I intron splicing factor CCM1; RNA-binding protein involved in the specific removal of group I introns in mitochondrial encoded transcripts. Maintains the stability of the small subunit mitochondrial 15S rRNA and thus the expression of the mitochondrial genome (By similarity); Belongs to the CCM1 family. (725 aa)
C4R5R1_KOMPG5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (994 aa)
C4R5Z8_KOMPGUncharacterized protein. (859 aa)
C4R600_KOMPGRibonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (165 aa)
C4R601_KOMPGSKIP_SNW domain-containing protein. (456 aa)
C4R607_KOMPGUncharacterized protein. (276 aa)
C4R9F0_KOMPGSerine/threonine protein kinase. (751 aa)
C4R9C7_KOMPGSubunit of the CCR4-NOT complex. (537 aa)
C4R9B1_KOMPGDeletion mutant is synthetically lethal with MEN mutants. (466 aa)
C4R9A1_KOMPGRNA polymerase II subunit. (171 aa)
C4R989_KOMPGNonsense-mediated mRNA decay protein 2. (953 aa)
C4R977_KOMPGCir_N domain-containing protein. (178 aa)
C4R958_KOMPGUncharacterized protein. (622 aa)
C4R900_KOMPGU1 snRNP protein involved in splicing, required for U1 snRNP biogenesis. (485 aa)
C4R8X3_KOMPGUncharacterized protein. (206 aa)
C4R8X2_KOMPGSmall nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (115 aa)
C4R8V3_KOMPGSplicing factor associated with the spliceosome. (473 aa)
C4R8S4_KOMPGUncharacterized protein. (455 aa)
C4R8Q8_KOMPGRRM domain-containing protein. (192 aa)
C4R8P3_KOMPGUncharacterized protein. (355 aa)
C4R8K4_KOMPGUncharacterized protein. (190 aa)
C4R8A2_KOMPGSubunit of both RNase MRP and nuclear RNase P. (301 aa)
C4R899_KOMPGSubunit of the exosome, which is an essential complex present in both nucleus and cytoplasm. (301 aa)
C4R873_KOMPGSplicing factor, component of the U4/U6-U5 snRNP complex. (898 aa)
C4R838_KOMPGWW domain-containing protein. (447 aa)
C4R832_KOMPGProtein involved in regulation of mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p). (707 aa)
C4R821_KOMPGComponent of the CCR4-NOT transcriptional complex. (768 aa)
C4R805_KOMPGMember of the Sir2 family of NAD(+)-dependent protein deacetylases. (398 aa)
C4R7Y6_KOMPGUncharacterized protein. (488 aa)
C4R7X6_KOMPGLsm (Like Sm) protein. (101 aa)
C4R7V7_KOMPGComponent of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels. (1978 aa)
C4R7N7_KOMPGProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (322 aa)
C4R7H3_KOMPGUncharacterized protein. (195 aa)
C4R7H2_KOMPGTranscription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1500 aa)
C4R7G5_KOMPGWD_REPEATS_REGION domain-containing protein. (490 aa)
C4R7E0_KOMPGUncharacterized protein. (68 aa)
C4R7A6_KOMPGDEAD-box protein required for efficient splicing of mitochondrial Group I and II introns; Belongs to the DEAD box helicase family. (673 aa)
C4R797_KOMPGFe2OG dioxygenase domain-containing protein. (615 aa)
C4R786_KOMPGFHA domain-containing protein. (202 aa)
C4R784_KOMPGCatalytic subunit of TRAMP (Trf4/Pap2p-Mtr4p-Air1p/2p). (601 aa)
C4R779_KOMPGUncharacterized protein. (338 aa)
C4R777_KOMPGEvolutionarily conserved subunit of the CCR4-NOT complex involved in controlling mRNA initiation. (359 aa)
C4R751_KOMPGEssential ATP-dependent RNA helicase of the DEAD-box protein family; Belongs to the DEAD box helicase family. (537 aa)
C4R744_KOMPGCatalytic subunit of the Dcp1p-Dcp2p decapping enzyme complex. (905 aa)
C4R729_KOMPGtRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs. (618 aa)
C4R707_KOMPGHistone H2A; Belongs to the histone H2A family. (132 aa)
C4R6X9_KOMPGRNAase III. (524 aa)
C4R6X8_KOMPGUncharacterized protein. (599 aa)
C4R6U7_KOMPGSubunit of the SF3a splicing factor complex, required for spliceosome assembly. (457 aa)
C4R6T4_KOMPGSplicing factor that is found in the Cef1p subcomplex of the spliceosome. (452 aa)
C4R6M1_KOMPGComponent of the spliceosome complex involved in pre-mRNA splicing. (253 aa)
C4R6I4_KOMPGSerine-threonine kinase and endoribonuclease. (1162 aa)
C4R6H0_KOMPGPseudouridine synthase. (666 aa)
C4R6G1_KOMPGUncharacterized protein. (215 aa)
C4R6F6_KOMPGComponent of the U4/U6-U5 snRNP complex, involved in the second catalytic step of splicing. (2427 aa)
C4R6F5_KOMPGzf-C3H1 domain-containing protein. (482 aa)
C4R6E9_KOMPGUncharacterized protein. (180 aa)
C4R6E3_KOMPGProtein involved in rRNA processing. (291 aa)
C4R6B9_KOMPGCatalytic component of the exosome, involved in RNA processing and degradation; Belongs to the RNR ribonuclease family. (958 aa)
C4R6B8_KOMPGRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
C4R6B2_KOMPGComponent of the Paf1p complex. (1044 aa)
C4R668_KOMPGProtein involved in pre-mRNA splicing. (1179 aa)
C4R650_KOMPGCytoplasmic mRNA cap binding protein; Belongs to the eukaryotic initiation factor 4E family. (202 aa)
C4R631_KOMPGProtein involved in rRNA processing. (298 aa)
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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