STRINGSTRING
Deba_1090 Deba_1090 Deba_1091 Deba_1091
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Deba_1090COGs: COG2142 Succinate dehydrogenase hydrophobic anchor subunit; InterPro IPR000701:IPR014312; KEGG: cts:Ctha_0457 succinate dehydrogenase, membrane subunit, putative; PFAM: succinate dehydrogenase cytochrome b subunit; SPTR: B3QUM2 Succinate dehydrogenase, membrane subunit, putative; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein. (122 aa)
Deba_1091InterPro IPR000701:IPR014314:IPR014312; KEGG: rmr:Rmar_0208 succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; SPTR: D0MD04 Succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase, cytochrome b556 subunit. (125 aa)
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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