(21 nodes) Selenocompound metabolism network (Gaeumannomyces tritici)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GGTG_14079	Cystathionine gamma-synthase. (609 aa)
	GGTG_00848	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (695 aa)
	GGTG_01973	Cysteine desulfurase. (404 aa)
	GGTG_01982	Uncharacterized protein. (453 aa)
	GGTG_02544	Methionine synthase. (576 aa)
	GGTG_04725	Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family. (728 aa)
	GGTG_05011	Uncharacterized protein. (1305 aa)
	GGTG_05346	Uncharacterized protein. (582 aa)
	GGTG_06246	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (589 aa)
	GGTG_07823	Vacuolar protein sorting 53. (874 aa)
	GGTG_07824	Thioredoxin reductase. (333 aa)
	GGTG_07983	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (590 aa)
	GGTG_08779	Uncharacterized protein. (464 aa)
	GGTG_08959	Meth_synt_2 domain-containing protein. (398 aa)
	GGTG_09133	Uncharacterized protein. (2328 aa)
	GGTG_11099	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase. (766 aa)
	GGTG_12836	Uncharacterized protein. (207 aa)
	GGTG_12843	Uncharacterized protein. (434 aa)
	GGTG_13333	C3H1-type domain-containing protein. (1950 aa)
	GGTG_13335	Uncharacterized protein. (91 aa)
	GGTG_13691	Uncharacterized protein. (258 aa)

Your Current Organism:

Gaeumannomyces tritici

NCBI taxonomy Id: 644352
Other names: G. tritici R3-111a-1, Gaeumannomyces graminis var. tritici R3-111a-1, Gaeumannomyces tritici R3-111a-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GGTG_00848	GGTG_01982	J3NHW2	J3NL41	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.424
GGTG_00848	GGTG_02544	J3NHW2	J3NMN8	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	Methionine synthase.	0.684
GGTG_00848	GGTG_05346	J3NHW2	J3NVN3	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.424
GGTG_00848	GGTG_06246	J3NHW2	J3NY93	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.839
GGTG_00848	GGTG_08779	J3NHW2	J3P5J0	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.594
GGTG_00848	GGTG_08959	J3NHW2	J3P619	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	Meth_synt_2 domain-containing protein.	0.684
GGTG_00848	GGTG_11099	J3NHW2	J3PC76	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase.	0.797
GGTG_00848	GGTG_12843	J3NHW2	J3PH63	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.813
GGTG_00848	GGTG_14079	J3NHW2	J3PKL6	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	Cystathionine gamma-synthase.	0.424
GGTG_01973	GGTG_13335	J3NL32	J3PIK6	Cysteine desulfurase.	Uncharacterized protein.	0.707
GGTG_01982	GGTG_00848	J3NL41	J3NHW2	Uncharacterized protein.	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.424
GGTG_01982	GGTG_02544	J3NL41	J3NMN8	Uncharacterized protein.	Methionine synthase.	0.855
GGTG_01982	GGTG_05346	J3NL41	J3NVN3	Uncharacterized protein.	Uncharacterized protein.	0.931
GGTG_01982	GGTG_06246	J3NL41	J3NY93	Uncharacterized protein.	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.516
GGTG_01982	GGTG_07983	J3NL41	J3P395	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.424
GGTG_01982	GGTG_08779	J3NL41	J3P5J0	Uncharacterized protein.	Uncharacterized protein.	0.927
GGTG_01982	GGTG_08959	J3NL41	J3P619	Uncharacterized protein.	Meth_synt_2 domain-containing protein.	0.859
GGTG_01982	GGTG_11099	J3NL41	J3PC76	Uncharacterized protein.	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase.	0.957
GGTG_01982	GGTG_12843	J3NL41	J3PH63	Uncharacterized protein.	Uncharacterized protein.	0.926
GGTG_01982	GGTG_13335	J3NL41	J3PIK6	Uncharacterized protein.	Uncharacterized protein.	0.567