STRINGSTRING
Tmar_0453 Tmar_0453 Tmar_0454 Tmar_0454 Tmar_0563 Tmar_0563 Tmar_0624 Tmar_0624 Tmar_0631 Tmar_0631 Tmar_0774 Tmar_0774 Tmar_0856 Tmar_0856 Tmar_1292 Tmar_1292 Tmar_1906 Tmar_1906 Tmar_1908 Tmar_1908
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tmar_0453Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: aac:Aaci_1572 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; PFAM: MerR family regulatory protein. (215 aa)
Tmar_0454COGs: COG0174 Glutamine synthetase; InterPro IPR008146; KEGG: mta:Moth_1294 L-glutamine synthetase; PFAM: glutamine synthetase catalytic region; SPTR: Glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I. (439 aa)
Tmar_0563Formamidase; COGs: COG2421 acetamidase/formamidase; InterPro IPR004304; KEGG: sth:STH1213 acetamidase/formamidase; PFAM: Acetamidase/Formamidase; PRIAM: Formamidase; SPTR: Acetamidase/formamidase; PFAM: Acetamidase/Formamidase family. (409 aa)
Tmar_0624COGs: COG0174 Glutamine synthetase; InterPro IPR008147: IPR008146: IPR004809; KEGG: pth:PTH_0733 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I. (444 aa)
Tmar_0631Glutamate synthase (NADPH) large subunit; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR017932: IPR000583: IPR006982: IPR002932: IPR 002489; KEGG: rrs:RoseRS_2985 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (NADH); SPTR: Glutamate synthase (NADPH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II. (1642 aa)
Tmar_0774COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: mta:Moth_2018 ferredoxin-dependent glutamate synthase; PFAM: ferredoxin-dependent glutamate synthase; SPTR: Ferredoxin-dependent glutamate synthase; PFAM: Conserved region in glutamate synthase; Belongs to the glutamate synthase family. (477 aa)
Tmar_0856COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097: IPR006096: IPR006095; KEGG: gwc:GWCH70_0811 Glu/Leu/Phe/Val dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; SPTR: Glu/Leu/Phe/Val dehydrogenase, C terminal; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (530 aa)
Tmar_1292COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006095: IPR014362: IPR006097: IPR006096; KEGG: tte:TTE1205 glutamate dehydrogenase/leucine dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; SPTR: Glu/Leu/Phe/Val dehydrogenase, C terminal; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (444 aa)
Tmar_1906COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: sti:Sthe_2870 amidohydrolase 2; PFAM: amidohydrolase 2; SPTR: Amidohydrolase 2; PFAM: Amidohydrolase. (377 aa)
Tmar_1908Glutamate--ammonia ligase; COGs: COG0174 Glutamine synthetase; InterPro IPR008146; KEGG: sro:Sros_2916 glutamate-ammonia ligase; PFAM: glutamine synthetase catalytic region; PRIAM: Glutamate--ammonia ligase; SPTR: Glutamate-ammonia ligase; PFAM: Glutamine synthetase, catalytic domain. (458 aa)
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.