(36 nodes) Actin cortical patch network (Colletotrichum graminicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GLRG_03475	WD domain-containing protein. (606 aa)
	GLRG_03837	SH3 domain-containing protein. (1135 aa)
	GLRG_04207	UBA/TS-N domain-containing protein. (689 aa)
	GLRG_04216	Uncharacterized protein. (740 aa)
	GLRG_04265	BAR domain-containing protein. (432 aa)
	GLRG_09207	Uncharacterized protein. (649 aa)
	GLRG_04624	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (169 aa)
	GLRG_04625	Uncharacterized protein. (836 aa)
	GLRG_04644	ANTH domain-containing protein. (1053 aa)
	GLRG_04662	RhoGAP domain-containing protein. (772 aa)
	GLRG_04889	Endonuclease/Exonuclease/phosphatase. (1184 aa)
	GLRG_00696	Uncharacterized protein. (250 aa)
	GLRG_01047	BAR domain-containing protein. (220 aa)
	GLRG_01592	WH2 domain-containing protein. (459 aa)
	GLRG_01608	SH3 domain-containing protein. (773 aa)
	GLRG_02413	WH1 domain-containing protein. (637 aa)
	GLRG_02326	Coronin; Belongs to the WD repeat coronin family. (612 aa)
	GLRG_05034	Dynamin central region; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (692 aa)
	GLRG_11316	VHS domain-containing protein. (470 aa)
	GLRG_10163	E3 ubiquitin-protein ligase. (819 aa)
	GLRG_05255	Actin; Belongs to the actin family. (439 aa)
	GLRG_05473	SH3 domain-containing protein. (419 aa)
	GLRG_05851	SH3 domain-containing protein. (1151 aa)
	GLRG_06178	GMF family protein. (142 aa)
	GLRG_06243	Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (193 aa)
	GLRG_06473	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1682 aa)
	GLRG_06619	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (391 aa)
	GLRG_06782	DUF2013 domain-containing protein. (493 aa)
	GLRG_07332	UBA/TS-N domain-containing protein. (1230 aa)
	GLRG_08385	Uncharacterized protein. (397 aa)
	GLRG_04424	Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (363 aa)
	GLRG_09554	Uncharacterized protein. (670 aa)
	GLRG_00120	Uncharacterized protein. (1500 aa)
	GLRG_00088	Calponin-homology (CH) domain-containing protein. (643 aa)
	GLRG_02694	Adenylyl cyclase-associated protein; Belongs to the CAP family. (530 aa)
	GLRG_02949	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1228 aa)

Your Current Organism:

Colletotrichum graminicola

NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GLRG_00088	GLRG_01608	E3Q2W5	E3Q6L6	Calponin-homology (CH) domain-containing protein.	SH3 domain-containing protein.	0.629
GLRG_00088	GLRG_03475	E3Q2W5	E3QBJ2	Calponin-homology (CH) domain-containing protein.	WD domain-containing protein.	0.820
GLRG_00088	GLRG_03837	E3Q2W5	E3QDI8	Calponin-homology (CH) domain-containing protein.	SH3 domain-containing protein.	0.720
GLRG_00088	GLRG_05255	E3Q2W5	E3QGX3	Calponin-homology (CH) domain-containing protein.	Actin; Belongs to the actin family.	0.707
GLRG_00088	GLRG_06619	E3Q2W5	E3QKT7	Calponin-homology (CH) domain-containing protein.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.700
GLRG_00088	GLRG_09207	E3Q2W5	E3QT75	Calponin-homology (CH) domain-containing protein.	Uncharacterized protein.	0.862
GLRG_00696	GLRG_03475	E3Q3F0	E3QBJ2	Uncharacterized protein.	WD domain-containing protein.	0.578
GLRG_00696	GLRG_03837	E3Q3F0	E3QDI8	Uncharacterized protein.	SH3 domain-containing protein.	0.637
GLRG_00696	GLRG_05255	E3Q3F0	E3QGX3	Uncharacterized protein.	Actin; Belongs to the actin family.	0.750
GLRG_00696	GLRG_06243	E3Q3F0	E3QJR1	Uncharacterized protein.	Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.	0.454
GLRG_00696	GLRG_06619	E3Q3F0	E3QKT7	Uncharacterized protein.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.664
GLRG_00696	GLRG_09207	E3Q3F0	E3QT75	Uncharacterized protein.	Uncharacterized protein.	0.490
GLRG_01047	GLRG_01592	E3Q5D6	E3Q6K0	BAR domain-containing protein.	WH2 domain-containing protein.	0.659
GLRG_01047	GLRG_01608	E3Q5D6	E3Q6L6	BAR domain-containing protein.	SH3 domain-containing protein.	0.742
GLRG_01047	GLRG_02413	E3Q5D6	E3Q6V5	BAR domain-containing protein.	WH1 domain-containing protein.	0.798
GLRG_01047	GLRG_02949	E3Q5D6	E3QAB7	BAR domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.625
GLRG_01047	GLRG_03837	E3Q5D6	E3QDI8	BAR domain-containing protein.	SH3 domain-containing protein.	0.607
GLRG_01047	GLRG_04216	E3Q5D6	E3QDY4	BAR domain-containing protein.	Uncharacterized protein.	0.568
GLRG_01047	GLRG_04265	E3Q5D6	E3QE33	BAR domain-containing protein.	BAR domain-containing protein.	0.973
GLRG_01047	GLRG_04644	E3Q5D6	E3QF62	BAR domain-containing protein.	ANTH domain-containing protein.	0.520