STRINGSTRING
GLRG_07114 GLRG_07114 GLRG_02636 GLRG_02636 GLRG_02732 GLRG_02732 GLRG_03852 GLRG_03852 GLRG_04740 GLRG_04740 GLRG_04963 GLRG_04963 GLRG_05225 GLRG_05225 GLRG_06954 GLRG_06954 GLRG_00103 GLRG_00103 GLRG_02513 GLRG_02513 GLRG_01627 GLRG_01627
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GLRG_07114Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1052 aa)
GLRG_02636eIF-5a domain-containing protein. (186 aa)
GLRG_02732Eukaryotic translation initiation factor 5A. (163 aa)
GLRG_03852Ribosomal protein L2. (388 aa)
GLRG_04740Ribosomal protein L14. (147 aa)
GLRG_049635'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1407 aa)
GLRG_05225KOW domain-containing protein domain-containing protein. (376 aa)
GLRG_06954Ribosomal protein L24. (136 aa)
GLRG_00103Ribosomal Proteins L2 domain-containing protein. (255 aa)
GLRG_0251340S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (262 aa)
GLRG_0162760S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
Your Current Organism:
Colletotrichum graminicola
NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001
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