(15 nodes) CDC42 GTPase cycle network (Colletotrichum graminicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GLRG_04461	Uncharacterized protein. (246 aa)
	GLRG_08353	RhoGAP domain-containing protein. (1180 aa)
	GLRG_08201	CDC24 Calponin. (1013 aa)
	GLRG_07332	UBA/TS-N domain-containing protein. (1230 aa)
	GLRG_06465	GH131_N domain-containing protein. (303 aa)
	GLRG_04662	RhoGAP domain-containing protein. (772 aa)
	GLRG_04462	RhoGEF domain-containing protein. (1547 aa)
	GLRG_08878	GH131_N domain-containing protein. (284 aa)
	GLRG_03646	Ras family protein. (219 aa)
	GLRG_00194	RhoGAP domain-containing protein. (918 aa)
	GLRG_11349	RHO protein GDP dissociation inhibitor. (246 aa)
	GLRG_10435	RhoGAP domain-containing protein. (1302 aa)
	GLRG_10035	Uncharacterized protein. (311 aa)
	GLRG_09904	GH131_N domain-containing protein. (139 aa)
	GLRG_09745	GH131_N domain-containing protein. (287 aa)

Your Current Organism:

Colletotrichum graminicola

NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GLRG_00194	GLRG_03646	E3Q371	E3QCB4	RhoGAP domain-containing protein.	Ras family protein.	0.674
GLRG_00194	GLRG_04662	E3Q371	E3QF80	RhoGAP domain-containing protein.	RhoGAP domain-containing protein.	0.678
GLRG_00194	GLRG_08353	E3Q371	E3QQS1	RhoGAP domain-containing protein.	RhoGAP domain-containing protein.	0.842
GLRG_00194	GLRG_10435	E3Q371	E3QWQ3	RhoGAP domain-containing protein.	RhoGAP domain-containing protein.	0.517
GLRG_03646	GLRG_00194	E3QCB4	E3Q371	Ras family protein.	RhoGAP domain-containing protein.	0.674
GLRG_03646	GLRG_04461	E3QCB4	E3QEL1	Ras family protein.	Uncharacterized protein.	0.845
GLRG_03646	GLRG_04462	E3QCB4	E3QEL2	Ras family protein.	RhoGEF domain-containing protein.	0.845
GLRG_03646	GLRG_04662	E3QCB4	E3QF80	Ras family protein.	RhoGAP domain-containing protein.	0.867
GLRG_03646	GLRG_06465	E3QCB4	E3QKD3	Ras family protein.	GH131_N domain-containing protein.	0.519
GLRG_03646	GLRG_07332	E3QCB4	E3QMV0	Ras family protein.	UBA/TS-N domain-containing protein.	0.736
GLRG_03646	GLRG_08201	E3QCB4	E3QQB9	Ras family protein.	CDC24 Calponin.	0.996
GLRG_03646	GLRG_08353	E3QCB4	E3QQS1	Ras family protein.	RhoGAP domain-containing protein.	0.999
GLRG_03646	GLRG_08878	E3QCB4	E3QSA7	Ras family protein.	GH131_N domain-containing protein.	0.519
GLRG_03646	GLRG_09745	E3QCB4	E3QUR3	Ras family protein.	GH131_N domain-containing protein.	0.519
GLRG_03646	GLRG_09904	E3QCB4	E3QV70	Ras family protein.	GH131_N domain-containing protein.	0.519
GLRG_03646	GLRG_10035	E3QCB4	E3QVK3	Ras family protein.	Uncharacterized protein.	0.845
GLRG_03646	GLRG_10435	E3QCB4	E3QWQ3	Ras family protein.	RhoGAP domain-containing protein.	0.953
GLRG_03646	GLRG_11349	E3QCB4	E3QZB6	Ras family protein.	RHO protein GDP dissociation inhibitor.	0.982
GLRG_04461	GLRG_03646	E3QEL1	E3QCB4	Uncharacterized protein.	Ras family protein.	0.845
GLRG_04461	GLRG_08201	E3QEL1	E3QQB9	Uncharacterized protein.	CDC24 Calponin.	0.550