4 items (Colletotrichum graminicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GLRG_06152	GP-PDE domain-containing protein. (420 aa)
	GLRG_07135	Glycerophosphoryl diester phosphodiesterase. (417 aa)
	GLRG_08699	SPX domain-containing protein. (1024 aa)
	GLRG_10349	Glycerophosphoryl diester phosphodiesterase. (1185 aa)

Your Current Organism:

Colletotrichum graminicola

NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GLRG_06152	GLRG_08699	E3QJH0	E3QRD2	GP-PDE domain-containing protein.	SPX domain-containing protein.	0.761
GLRG_06152	GLRG_10349	E3QJH0	E3QWG7	GP-PDE domain-containing protein.	Glycerophosphoryl diester phosphodiesterase.	0.859
GLRG_07135	GLRG_08699	E3QMA3	E3QRD2	Glycerophosphoryl diester phosphodiesterase.	SPX domain-containing protein.	0.761
GLRG_07135	GLRG_10349	E3QMA3	E3QWG7	Glycerophosphoryl diester phosphodiesterase.	Glycerophosphoryl diester phosphodiesterase.	0.877
GLRG_08699	GLRG_06152	E3QRD2	E3QJH0	SPX domain-containing protein.	GP-PDE domain-containing protein.	0.761
GLRG_08699	GLRG_07135	E3QRD2	E3QMA3	SPX domain-containing protein.	Glycerophosphoryl diester phosphodiesterase.	0.761
GLRG_08699	GLRG_10349	E3QRD2	E3QWG7	SPX domain-containing protein.	Glycerophosphoryl diester phosphodiesterase.	0.960
GLRG_10349	GLRG_06152	E3QWG7	E3QJH0	Glycerophosphoryl diester phosphodiesterase.	GP-PDE domain-containing protein.	0.859
GLRG_10349	GLRG_07135	E3QWG7	E3QMA3	Glycerophosphoryl diester phosphodiesterase.	Glycerophosphoryl diester phosphodiesterase.	0.877
GLRG_10349	GLRG_08699	E3QWG7	E3QRD2	Glycerophosphoryl diester phosphodiesterase.	SPX domain-containing protein.	0.960