5 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_08097	Uncharacterized protein. (217 aa)
	SPPG_06086	Uncharacterized protein. (313 aa)
	SPPG_05374	Uncharacterized protein. (268 aa)
	SPPG_09328	Uncharacterized protein. (383 aa)
	SPPG_01071	MPN domain-containing protein. (260 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_01071	SPPG_05374	A0A0L0HQD8	A0A0L0HC59	MPN domain-containing protein.	Uncharacterized protein.	0.604
SPPG_01071	SPPG_06086	A0A0L0HQD8	A0A0L0HBX5	MPN domain-containing protein.	Uncharacterized protein.	0.659
SPPG_01071	SPPG_08097	A0A0L0HQD8	A0A0L0H707	MPN domain-containing protein.	Uncharacterized protein.	0.996
SPPG_01071	SPPG_09328	A0A0L0HQD8	A0A0L0HD67	MPN domain-containing protein.	Uncharacterized protein.	0.995
SPPG_05374	SPPG_01071	A0A0L0HC59	A0A0L0HQD8	Uncharacterized protein.	MPN domain-containing protein.	0.604
SPPG_05374	SPPG_08097	A0A0L0HC59	A0A0L0H707	Uncharacterized protein.	Uncharacterized protein.	0.784
SPPG_05374	SPPG_09328	A0A0L0HC59	A0A0L0HD67	Uncharacterized protein.	Uncharacterized protein.	0.625
SPPG_06086	SPPG_01071	A0A0L0HBX5	A0A0L0HQD8	Uncharacterized protein.	MPN domain-containing protein.	0.659
SPPG_06086	SPPG_08097	A0A0L0HBX5	A0A0L0H707	Uncharacterized protein.	Uncharacterized protein.	0.769
SPPG_08097	SPPG_01071	A0A0L0H707	A0A0L0HQD8	Uncharacterized protein.	MPN domain-containing protein.	0.996
SPPG_08097	SPPG_05374	A0A0L0H707	A0A0L0HC59	Uncharacterized protein.	Uncharacterized protein.	0.784
SPPG_08097	SPPG_06086	A0A0L0H707	A0A0L0HBX5	Uncharacterized protein.	Uncharacterized protein.	0.769
SPPG_08097	SPPG_09328	A0A0L0H707	A0A0L0HD67	Uncharacterized protein.	Uncharacterized protein.	0.998
SPPG_09328	SPPG_01071	A0A0L0HD67	A0A0L0HQD8	Uncharacterized protein.	MPN domain-containing protein.	0.995
SPPG_09328	SPPG_05374	A0A0L0HD67	A0A0L0HC59	Uncharacterized protein.	Uncharacterized protein.	0.625
SPPG_09328	SPPG_08097	A0A0L0HD67	A0A0L0H707	Uncharacterized protein.	Uncharacterized protein.	0.998